Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39774 | Soybean | nucleus | 94.1 | 88.42 |
| Bra024739.1-P | Field mustard | cytosol | 21.95 | 80.61 |
| CDY70074 | Canola | cytosol | 52.59 | 80.38 |
| KRH07246 | Soybean | nucleus | 81.47 | 80.22 |
| KRH07767 | Soybean | nucleus | 81.26 | 80.02 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 73.6 | 73.91 |
| AT1G31730.1 | Thale cress | cytosol | 69.05 | 71.11 |
| Bra023199.1-P | Field mustard | cytosol | 68.43 | 70.47 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 59.94 | 70.27 |
| Solyc08g075310.2.1 | Tomato | cytosol | 70.39 | 70.25 |
| CDY42099 | Canola | cytosol | 67.81 | 69.39 |
| CDX84997 | Canola | cytosol | 60.35 | 67.01 |
| GSMUA_Achr11P... | Banana | cytosol | 64.39 | 66.81 |
| Zm00001d025314_P001 | Maize | cytosol | 11.08 | 66.46 |
| Os01t0916200-02 | Rice | plasma membrane | 57.25 | 65.68 |
| EES04102 | Sorghum | cytosol | 65.73 | 65.53 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 64.49 | 65.37 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 64.29 | 65.16 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 64.08 | 64.28 |
| Zm00001d012061_P005 | Maize | cytosol | 64.18 | 63.59 |
| Zm00001d042370_P003 | Maize | cytosol | 62.22 | 61.9 |
| TraesCS3A01G421500.1 | Wheat | golgi | 64.39 | 60.15 |
| PGSC0003DMT400004931 | Potato | nucleus | 22.77 | 52.88 |
| KRH69527 | Soybean | mitochondrion | 19.36 | 21.42 |
| KRH74623 | Soybean | mitochondrion | 19.15 | 21.24 |
| KRH45711 | Soybean | cytosol, mitochondrion | 18.32 | 20.09 |
| KRH26563 | Soybean | endoplasmic reticulum | 18.32 | 17.35 |
| KRH22743 | Soybean | cytosol, endoplasmic reticulum | 18.22 | 17.25 |
| KRH41691 | Soybean | cytosol | 15.01 | 15.83 |
| KRH60392 | Soybean | cytosol | 15.53 | 15.35 |
| KRG99303 | Soybean | nucleus | 2.07 | 11.11 |
| KRH25154 | Soybean | cytosol | 4.14 | 9.83 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100819573 | MapMan:22.5.2.2.1 | EMBL:ACUP02000613 | InterPro:AP4_complex_esu | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | EnsemblPlantsGene:GLYMA_01G153200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 |
| UniProt:I1J870 | InterPro:IPR011989 | EnsemblPlants:KRH76456 | ProteinID:KRH76456 | ProteinID:KRH76456.1 | PFAM:PF01602 |
| PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | UniParc:UPI00023BDCAC | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:49031747..49040296
Molecular Weight (calculated)
106007.0 Da
IEP (calculated)
6.274
GRAVY (calculated)
-0.212
Length
966 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSHHGHSKE FLDLIKSIGE ARSKAEEDRI VLREIETLKR LLNDADTPKR KIKEYIIRLL YVEMLGHDAS FGYIHAVKMT HHDALLLKRT GYLAVTLFLS
101: DDHDLIILIV NTIQKDLASD NYLVVCAALN AVCRLINEET IPAVLPRVVD LLNHSKDAVR KKAVMSLHRF YLKSPSSVSH LLSNFRKRLC DNDPGVMGAS
201: LCPLFNLVSD DVHSYKDLVV SFVNILKQVA EHRLPKTYDY HQMPAPFIQI KLLKILALLG SGDKQASGHM YTVLEDIIRR SDSMTNIGNA VLYQCICCVA
301: SIYPNPKLLE AAADVIAKFL KSDSHNLKYM GIDALGRLIK LSPHIAEQHQ LAVIDCLEDP DDSLKRKTFE LLYKMTKSSN VEVIVDRMID YMISISDDHY
401: KTYIASRCVE LAEQFAPSNH WFIQTMNKVF EHAGDLVNIK VAHNLMRLIA EGFGEDDDAA DSQLRSSAAE SYLRIIGEPK LPSVFLQVIC WVLGEYGTAD
501: GKYSASYISG KLCDIAEAYS NDENVKAYAI SALLKIYAFE VAAGRKVDIL SECQSLIEES LASHSTDLQQ RAYELQALIG LDVQAVETIM PRDASCEDIE
601: VDKNLSFLNG YVQQSLERGA KSYIPEDVRT GMGNMNNFRS QDHHETLQHG LRFEAYEVPK APMQPKVTPV SFASSADIVP VPEVLSSRET HHISSVGSTS
701: EAGSSELKLR LDGVQKKWGK PMYSSSTSSA SVSYSTSQKP TNGATQVDGA TTVNSKVRDS YDSRKTQVEI TPEKQKLAAS LFGGSTKPEK RSSTSHKVSK
801: SSASAADGSQ GSKAAVVPND VAVEKTIHQP PPPDLLDLGE PTVTTAPPYV DPFKELEGLL DPSTKSATNH NVAAATNAPD IMSLYAETTA SGGYSIPVSG
901: GYDVNLLSEL SNAAAKATSG ETIVTSLPQS IMGRNAKDSL EKDALVRQMG VNPSSQNPNL FSDLLG
101: DDHDLIILIV NTIQKDLASD NYLVVCAALN AVCRLINEET IPAVLPRVVD LLNHSKDAVR KKAVMSLHRF YLKSPSSVSH LLSNFRKRLC DNDPGVMGAS
201: LCPLFNLVSD DVHSYKDLVV SFVNILKQVA EHRLPKTYDY HQMPAPFIQI KLLKILALLG SGDKQASGHM YTVLEDIIRR SDSMTNIGNA VLYQCICCVA
301: SIYPNPKLLE AAADVIAKFL KSDSHNLKYM GIDALGRLIK LSPHIAEQHQ LAVIDCLEDP DDSLKRKTFE LLYKMTKSSN VEVIVDRMID YMISISDDHY
401: KTYIASRCVE LAEQFAPSNH WFIQTMNKVF EHAGDLVNIK VAHNLMRLIA EGFGEDDDAA DSQLRSSAAE SYLRIIGEPK LPSVFLQVIC WVLGEYGTAD
501: GKYSASYISG KLCDIAEAYS NDENVKAYAI SALLKIYAFE VAAGRKVDIL SECQSLIEES LASHSTDLQQ RAYELQALIG LDVQAVETIM PRDASCEDIE
601: VDKNLSFLNG YVQQSLERGA KSYIPEDVRT GMGNMNNFRS QDHHETLQHG LRFEAYEVPK APMQPKVTPV SFASSADIVP VPEVLSSRET HHISSVGSTS
701: EAGSSELKLR LDGVQKKWGK PMYSSSTSSA SVSYSTSQKP TNGATQVDGA TTVNSKVRDS YDSRKTQVEI TPEKQKLAAS LFGGSTKPEK RSSTSHKVSK
801: SSASAADGSQ GSKAAVVPND VAVEKTIHQP PPPDLLDLGE PTVTTAPPYV DPFKELEGLL DPSTKSATNH NVAAATNAPD IMSLYAETTA SGGYSIPVSG
901: GYDVNLLSEL SNAAAKATSG ETIVTSLPQS IMGRNAKDSL EKDALVRQMG VNPSSQNPNL FSDLLG
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.