Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70074 | Canola | cytosol | 64.5 | 95.73 |
| Bra023199.1-P | Field mustard | cytosol | 93.71 | 93.71 |
| Bra024739.1-P | Field mustard | cytosol | 26.23 | 93.54 |
| CDY42099 | Canola | cytosol | 92.11 | 91.53 |
| CDX84997 | Canola | cytosol | 76.97 | 82.99 |
| Zm00001d025314_P001 | Maize | cytosol | 13.33 | 77.64 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 63.75 | 72.57 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 72.92 | 71.1 |
| Solyc08g075310.2.1 | Tomato | cytosol | 71.86 | 69.63 |
| KRH07767 | Soybean | nucleus | 72.49 | 69.32 |
| KRH76456 | Soybean | nucleus | 71.11 | 69.05 |
| KRH07246 | Soybean | nucleus | 72.17 | 69.01 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 69.19 | 68.1 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 68.76 | 67.68 |
| EES04102 | Sorghum | cytosol | 69.83 | 67.6 |
| GSMUA_Achr11P... | Banana | cytosol | 66.84 | 67.35 |
| Os01t0916200-02 | Rice | plasma membrane | 60.13 | 66.98 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 68.44 | 66.67 |
| Zm00001d012061_P005 | Maize | cytosol | 67.59 | 65.03 |
| Zm00001d042370_P003 | Maize | cytosol | 66.52 | 64.26 |
| KRH39774 | Soybean | nucleus | 70.26 | 64.11 |
| TraesCS3A01G421500.1 | Wheat | golgi | 69.08 | 62.67 |
| PGSC0003DMT400004931 | Potato | nucleus | 21.32 | 48.08 |
| AT1G23900.2 | Thale cress | mitochondrion | 19.19 | 20.55 |
| AT1G60070.2 | Thale cress | cytosol, mitochondrion | 18.87 | 19.71 |
| AT5G22780.1 | Thale cress | cytosol | 17.8 | 16.49 |
| AT5G22770.1 | Thale cress | cytosol | 17.7 | 16.4 |
| AT1G48760.2 | Thale cress | cytosol | 15.14 | 16.34 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | EntrezGene:840060 | ProteinID:AAG60138.1 | ProteinID:AEE31386.1 | InterPro:AP4_complex_esu |
| InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT1G31730 | EnsemblPlantsGene:AT1G31730 | RefSeq:AT1G31730 | TAIR:AT1G31730 |
| RefSeq:AT1G31730-TAIR-G | EnsemblPlants:AT1G31730.1 | TAIR:AT1G31730.1 | EMBL:AY136369 | Unigene:At.19687 | EMBL:BT000268 |
| InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0009506 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 |
| GO:GO:0030124 | InterPro:IPR011989 | RefSeq:NP_174454.2 | PFAM:PF01602 | PIRSF:PIRSF037097 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | UniProt:Q8L7A9 | SUPFAM:SSF48371 | UniParc:UPI00000AC57D | SEG:seg |
Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
Coordinates
chr1:+:11359512..11364288
Molecular Weight (calculated)
103741.0 Da
IEP (calculated)
5.193
GRAVY (calculated)
-0.315
Length
938 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.