Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004931 | Potato | nucleus | 40.08 | 93.27 |
| CDY70074 | Canola | cytosol | 53.51 | 81.96 |
| Bra024739.1-P | Field mustard | cytosol | 21.59 | 79.47 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 74.79 | 75.26 |
| AT1G31730.1 | Thale cress | cytosol | 69.63 | 71.86 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 60.54 | 71.12 |
| Bra023199.1-P | Field mustard | cytosol | 68.91 | 71.11 |
| KRH07767 | Soybean | nucleus | 71.49 | 70.54 |
| KRH76456 | Soybean | nucleus | 70.25 | 70.39 |
| KRH07246 | Soybean | nucleus | 70.66 | 69.72 |
| CDY42099 | Canola | cytosol | 67.98 | 69.7 |
| Zm00001d025314_P001 | Maize | cytosol | 11.47 | 68.94 |
| CDX84997 | Canola | cytosol | 60.64 | 67.47 |
| GSMUA_Achr11P... | Banana | cytosol | 64.15 | 66.7 |
| Os01t0916200-02 | Rice | plasma membrane | 57.64 | 66.27 |
| EES04102 | Sorghum | cytosol | 66.12 | 66.05 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 64.46 | 65.48 |
| KRH39774 | Soybean | nucleus | 69.42 | 65.37 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 64.26 | 65.27 |
| Zm00001d012061_P005 | Maize | cytosol | 65.08 | 64.62 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 64.15 | 64.49 |
| Zm00001d042370_P003 | Maize | cytosol | 62.71 | 62.51 |
| TraesCS3A01G421500.1 | Wheat | golgi | 64.15 | 60.06 |
| Solyc11g066760.1.1 | Tomato | cytosol | 11.78 | 24.41 |
| Solyc04g025870.2.1 | Tomato | plastid | 19.63 | 21.66 |
| Solyc05g005780.2.1 | Tomato | nucleus | 19.63 | 21.62 |
| Solyc06g074650.2.1 | Tomato | plastid | 18.29 | 17.4 |
| Solyc03g119270.1.1 | Tomato | nucleus | 14.67 | 14.64 |
| Solyc11g066770.1.1 | Tomato | cytosol | 4.13 | 9.22 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | InterPro:AP4_complex_esu | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 | InterPro:IPR011989 | UniProt:K4CMP8 | PFAM:PF01602 |
| PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc08g075310.2 | EnsemblPlants:Solyc08g075310.2.1 |
| UniParc:UPI000276B4FD | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr8:+:59403786..59419758
Molecular Weight (calculated)
106180.0 Da
IEP (calculated)
6.019
GRAVY (calculated)
-0.307
Length
968 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGGFGQS KEFLDLIKSI GEARSKAEED RIVINEIEIL KKRIIEPDIP KRKMKEYIMR SVYVEMLGHD ASFGYIHAVK MTHDDNLHLK RTGYLAVTLF
101: LNEDHDLIIL IVNTIQKDLK SDNYLVVCAA LNAVCKLINE ETIPAVLPQV VDLLGHSKEA VRKKAVMALH RFHQKSPSSV SHLVSNFRKR LCDNDPGVMG
201: STLCPLYDLI SEDVNSYKDL VVSFVSILKQ VAERRLPKSY DYHQMPAPFI QIKLLKILAL LGSGDKKASE QMYTIVGDIM RKSDSSSNIG NAILYECICC
301: VSSIHPNPKV LETAAEAVAK FLKNDSHNLK YLGIDALGRL IKISSEIAEP HQLAVIDCLE DPDDTLKRKT FELLYKMTKP SNVEVIVDRM IDYMMSISDN
401: HSKTEIASRC VELAEQFAPS NQWFIQTMNK VFEHAGDLVN LKVAHNLMRL IAEGFGKEDD TADSQLRLSA VESYLRIMGE PKLPSAFLQV ICWVLGEYGT
501: ADGKYSASYI TGKISDIAEA HSTDDMVKAY AVSALMKVYS FEIAAGRKVD ILPECQSFIE ELLASNSTDL QQRAYELQSV IGLDARAVEN IIPMDASCED
601: IVVDRELSFL NGYVEESLKK GAQPYIPESE RSGALSISSL RVEELHGSSG HSLRFEAYDL PKPSVPSRPP VPPVSSTELV PVPEPTYHRE FHEAVAPKFS
701: VSGTGSSEIK LRLDGVQKKW GKQTYSSSSP STTDSDTYKT QNGATQRDVT SSLSSKTRDV SYDSRRQQEE INPEKQKLAA SLFGGVSKTE KRPAAGHKTS
801: RPSSRVADKS HAEKSGPSDG GAVKASPQPP PDLLDMGEPT SISNTTFEDP FKQLEGLLDL NEGTAAVGSS SATKAPDFMS LYGDTSLSGQ NMGMTDLLST
901: GSGDANLISG ISHALDKNGH GTGSAVTLPA QLSKGPNTKE ALEKDALVRQ MGVNPTSQNP NLFKDLLG
101: LNEDHDLIIL IVNTIQKDLK SDNYLVVCAA LNAVCKLINE ETIPAVLPQV VDLLGHSKEA VRKKAVMALH RFHQKSPSSV SHLVSNFRKR LCDNDPGVMG
201: STLCPLYDLI SEDVNSYKDL VVSFVSILKQ VAERRLPKSY DYHQMPAPFI QIKLLKILAL LGSGDKKASE QMYTIVGDIM RKSDSSSNIG NAILYECICC
301: VSSIHPNPKV LETAAEAVAK FLKNDSHNLK YLGIDALGRL IKISSEIAEP HQLAVIDCLE DPDDTLKRKT FELLYKMTKP SNVEVIVDRM IDYMMSISDN
401: HSKTEIASRC VELAEQFAPS NQWFIQTMNK VFEHAGDLVN LKVAHNLMRL IAEGFGKEDD TADSQLRLSA VESYLRIMGE PKLPSAFLQV ICWVLGEYGT
501: ADGKYSASYI TGKISDIAEA HSTDDMVKAY AVSALMKVYS FEIAAGRKVD ILPECQSFIE ELLASNSTDL QQRAYELQSV IGLDARAVEN IIPMDASCED
601: IVVDRELSFL NGYVEESLKK GAQPYIPESE RSGALSISSL RVEELHGSSG HSLRFEAYDL PKPSVPSRPP VPPVSSTELV PVPEPTYHRE FHEAVAPKFS
701: VSGTGSSEIK LRLDGVQKKW GKQTYSSSSP STTDSDTYKT QNGATQRDVT SSLSSKTRDV SYDSRRQQEE INPEKQKLAA SLFGGVSKTE KRPAAGHKTS
801: RPSSRVADKS HAEKSGPSDG GAVKASPQPP PDLLDMGEPT SISNTTFEDP FKQLEGLLDL NEGTAAVGSS SATKAPDFMS LYGDTSLSGQ NMGMTDLLST
901: GSGDANLISG ISHALDKNGH GTGSAVTLPA QLSKGPNTKE ALEKDALVRQ MGVNPTSQNP NLFKDLLG
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.