Factsheet for Bra024739.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84997	Canola	cytosol	97.34	29.43
CDY42099	Canola	cytosol	98.1	27.33
Bra023199.1-P	Field mustard	cytosol	95.06	26.65
AT1G31730.1	Thale cress	cytosol	93.54	26.23
GSMUA_Achr8P08830_001	Banana	cytosol	78.71	25.12
Os01t0916200-02	Rice	plasma membrane	78.71	24.58
VIT_02s0087g00690.t01	Wine grape	nucleus	82.13	22.45
KRH76456	Soybean	nucleus	80.61	21.95
TraesCS3D01G417200.1	Wheat	cytosol	79.09	21.83
TraesCS3B01G457300.1	Wheat	cytosol, nucleus, plastid	79.09	21.83
KRH07767	Soybean	nucleus	81.37	21.81
EES04102	Sorghum	cytosol	80.23	21.77
Zm00001d042370_P003	Maize	cytosol	80.23	21.73
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	79.09	21.6
Solyc08g075310.2.1	Tomato	cytosol	79.47	21.59
KRH07246	Soybean	nucleus	80.23	21.51
GSMUA_Achr11P...	Banana	cytosol	75.29	21.27
Zm00001d012061_P005	Maize	cytosol	78.33	21.13
KRH39774	Soybean	nucleus	80.61	20.62
TraesCS3A01G421500.1	Wheat	golgi	79.09	20.12
Bra031528.1-P	Field mustard	mitochondrion	12.93	15.6
Bra024627.1-P	Field mustard	mitochondrion	27.38	8.26
Bra012393.1-P	Field mustard	mitochondrion	26.62	8.01
Bra022309.1-P	Field mustard	nucleus	19.77	6.07
Bra037603.1-P	Field mustard	cytosol	22.05	5.72
Bra002427.1-P	Field mustard	cytosol	21.29	5.56
Bra032266.1-P	Field mustard	nucleus	17.11	5.29
PGSC0003DMT400004931	Potato	nucleus	1.14	0.72
Zm00001d025314_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.5.2.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra024739	EnsemblPlants:Bra024739.1
EnsemblPlants:Bra024739.1-P	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	InterPro:IPR011989	UniProt:M4E7I4	PFAM:PF01602
PANTHER:PTHR22780	PANTHER:PTHR22780:SF13	SUPFAM:SSF48371	UniParc:UPI0002542733	SEG:seg	:

Description

AT1G31730 (E=1e-100) | epsilon-adaptin, putative

Coordinates

chrA09:-:23131443..23132849

Molecular Weight (calculated)

29329.2 Da

IEP (calculated)

4.659

GRAVY (calculated)

-0.087

Length

263 amino acids

Sequence
(BLAST)

001: MALLSSGDKS ASEMMYMVLG DLFRKCDSST NIGNAILYEC IRCISCIIPS PKLLEDAAEA ISKFLKSDSH NLKYMGIDGL GRLIKISSDI AEQHQLAVID
101: CLEDPDDTLK RKTFELLYKM TKSSNVEVIV DRMIDYMISI NDNHYKTEIA SRCVELAEQF APSNQWFIQI MNKVFEHAGD LVNIKVAHNL MRLIAEGFGE
201: DDDDADNKLR LSAVISWVLG EYGTADGKYS ASYISGKLCD VADAYSSDET VKVAPLHSNM MHL

Best Arabidopsis Sequence Match ( AT1G31730.1 )
(BLAST)

001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG

Arabidopsis Description

AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.