Factsheet for Bra031528.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
plasma membrane 1
cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G019420.1	Barley	cytosol	26.61	68.24
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	26.15	67.06
HORVU3Hr1G053020.1	Barley	cytosol	25.69	65.88
CDY24514	Canola	cytosol	59.63	64.36
HORVU7Hr1G050510.16	Barley	cytosol	27.06	35.98
HORVU3Hr1G040310.1	Barley	cytosol	28.44	34.64
Os02t0805000-01	Rice	cytosol, plasma membrane	39.91	17.79
AT1G60070.2	Thale cress	cytosol, mitochondrion	62.84	15.26
VIT_01s0026g00310.t01	Wine grape	mitochondrion	58.26	14.46
KRH74623	Soybean	mitochondrion	55.96	14.01
Solyc04g025870.2.1	Tomato	plastid	55.96	13.91
KRH69527	Soybean	mitochondrion	55.05	13.75
KRH45711	Soybean	cytosol, mitochondrion	55.5	13.73
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	53.67	13.56
Bra012393.1-P	Field mustard	mitochondrion	54.13	13.5
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	54.13	13.42
Solyc05g005780.2.1	Tomato	nucleus	53.67	13.31
Bra024627.1-P	Field mustard	mitochondrion	52.75	13.19
Os06t0167100-01	Rice	plasma membrane	51.83	12.99
Bra024739.1-P	Field mustard	cytosol	15.6	12.93
TraesCS6A01G373200.1	Wheat	mitochondrion	52.75	12.89
HORVU7Hr1G027050.3	Barley	cytosol	51.38	12.89
GSMUA_Achr9P18340_001	Banana	mitochondrion	50.92	12.86
KXG19397	Sorghum	cytosol, plastid	51.38	12.81
Zm00001d045195_P002	Maize	cytosol	50.92	12.8
TraesCS6B01G410900.2	Wheat	cytosol	52.29	12.72
TraesCS7D01G128900.2	Wheat	cytosol	50.46	12.64
TraesCS7A01G129800.3	Wheat	peroxisome	50.46	12.64
Zm00001d036305_P003	Maize	mitochondrion	51.83	12.47
TraesCS7B01G029800.2	Wheat	cytosol	49.54	12.41
TraesCS6D01G357400.1	Wheat	golgi	50.92	12.37
Zm00001d051998_P003	Maize	cytosol	49.08	11.88
KXG31353	Sorghum	cytosol	48.17	11.65
HORVU6Hr1G087920.7	Barley	mitochondrion	52.75	11.47
GSMUA_Achr10P...	Banana	cytosol	10.09	5.99
Bra037603.1-P	Field mustard	cytosol	24.31	5.23
Bra002427.1-P	Field mustard	cytosol	23.39	5.06
Bra023199.1-P	Field mustard	cytosol	18.35	4.26
Bra022309.1-P	Field mustard	nucleus	13.76	3.5
Bra032266.1-P	Field mustard	nucleus	13.3	3.41
KRG99303	Soybean	nucleus	0.0	0.0
GSMUA_Achr10P...	Banana	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra031528	EnsemblPlants:Bra031528.1
EnsemblPlants:Bra031528.1-P	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	InterPro:IPR011989	UniProt:M4ERV1	PFAM:PF01602
PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI0002544AB8	:	:

Description

AT1G60070 (E=9e-057) | binding / clathrin binding / protein binding / protein transporter

Coordinates

chrA01:-:16702035..16705162

Molecular Weight (calculated)

25170.3 Da

IEP (calculated)

7.097

GRAVY (calculated)

-0.088

Length

218 amino acids

Sequence
(BLAST)

001: MLTRALTVDS KAVQRHRATI LECVKDSDAS IQRRALELIY LLVNVNNVKP LAKELIEYLE VREQDFKGVL TAKICSIERS KLFAPEKIWY IDQMLKVLSE
101: AGNYVKDDVW HALIVVITNA PDLHGRTNYG EYHHPAVFVV TCDWYCRWKL CVPHILKNVN SYLEDFSDDL PVSRLKYNAL DDFQEVFQTT SISVVWTSWK
201: SSGLPGSRMD FLKVVWTS

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.