Factsheet for Os02t0805000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G019420.1	Barley	cytosol	15.75	90.59
HORVU3Hr1G053020.1	Barley	cytosol	15.54	89.41
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	15.13	87.06
GSMUA_Achr10P...	Banana	mitochondrion	55.42	80.42
HORVU3Hr1G040310.1	Barley	cytosol	28.43	77.65
CDX91727	Canola	mitochondrion	18.2	74.17
HORVU7Hr1G050510.16	Barley	cytosol	23.11	68.9
CDY24514	Canola	cytosol	24.74	59.9
TraesCS6B01G410900.2	Wheat	cytosol	89.57	48.88
TraesCS6A01G373200.1	Wheat	mitochondrion	89.16	48.88
Zm00001d051998_P003	Maize	cytosol	89.78	48.72
KXG31353	Sorghum	cytosol	89.57	48.61
Os06t0167100-01	Rice	plasma membrane	86.3	48.51
TraesCS6D01G357400.1	Wheat	golgi	88.75	48.38
GSMUA_Achr9P18340_001	Banana	mitochondrion	81.19	46.0
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	80.16	45.42
HORVU6Hr1G087920.7	Barley	mitochondrion	92.43	45.06
VIT_01s0026g00310.t01	Wine grape	mitochondrion	78.53	43.74
KRH69527	Soybean	mitochondrion	75.87	42.5
CDY59088	Canola	mitochondrion	75.66	42.43
Bra024627.1-P	Field mustard	mitochondrion	75.66	42.43
CDY25807	Canola	mitochondrion	75.87	42.4
Bra012393.1-P	Field mustard	mitochondrion	75.66	42.33
CDY28466	Canola	mitochondrion	75.66	42.33
CDY47649	Canola	mitochondrion	75.46	42.32
KRH74623	Soybean	mitochondrion	75.26	42.25
Solyc04g025870.2.1	Tomato	plastid	75.66	42.19
AT1G23900.2	Thale cress	mitochondrion	75.46	42.12
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	73.62	40.96
AT1G60070.2	Thale cress	cytosol, mitochondrion	75.05	40.87
KRH45711	Soybean	cytosol, mitochondrion	73.62	40.86
Solyc05g005780.2.1	Tomato	nucleus	73.21	40.73
Bra031528.1-P	Field mustard	mitochondrion	17.79	39.91
CDY33619	Canola	mitochondrion	34.56	37.14
KRG99303	Soybean	nucleus	13.29	36.11
Os03t0112101-00	Rice	plasma membrane	24.13	30.26
Os01t0916200-02	Rice	plasma membrane	19.22	11.16
Os01t0512200-01	Rice	plasma membrane	20.86	10.79
GSMUA_Achr10P...	Banana	cytosol	0.41	0.54
Os03t0112400-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAF10350.1	ProteinID:BAS81455.1
InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	InterPro:IPR011989	EnsemblPlantsGene:Os02g0805000	EnsemblPlants:Os02t0805000-01	PFAM:PF01602
PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	UniProt:Q0DWN8	SUPFAM:SSF48371	UniParc:UPI0000DF08CD	SEG:seg

Description

Armadillo-type fold domain containing protein. (Os02t0805000-01)

Coordinates

chr2:-:34336386..34344186

Molecular Weight (calculated)

54952.2 Da

IEP (calculated)

7.006

GRAVY (calculated)

-0.005

Length

489 amino acids

Sequence
(BLAST)

001: MDTVEKIVED FASDIAMGPF SSGTRLRDMI RAIRACKTAA EERAVVRREC AEIREAIGEN QQEIRHRNMA KLMFIHMLGY PTHFGQMECL KLIAAAGYPE
101: KRIGYLGLML LLDERQEVLM LVTNSLKQDL NHSNQFIVGL ALCALGNICS AEMARDLSPE VERLMRSRDV NTKKKAALCA IRIVRKVPDL AENFMGLASS
201: LLKEKHHGIL ISAVQLCTEL CKASKDALEY LRKNCVEGLV RILRDVSNSS YAPEYDVAGI SDPFLHIRVL KLMRILGQGD ADCSEYMNDI LAQVATKNES
301: NKNAANAILY ECVQTIMGIE ATSGLRVLAI NILGRFLSNR DNNIRYVALN MLMRAITVDT QAVQRHRTTI LECVKDADAS IRKRALELVF LLVNDTNVKP
401: LTKELVDYLD SADPDFKEDL TAKICSIVEK FSQEKLWYLD QMFKVLSLAG NHVKDDVWHA LVVVISNASE LQGYSVRLLY MALQAFVDQ

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.