Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G373200.1 | Wheat | mitochondrion | 96.43 | 96.86 |
| TraesCS6D01G357400.1 | Wheat | golgi | 95.65 | 95.54 |
| Os02t0805000-01 | Rice | cytosol, plasma membrane | 48.88 | 89.57 |
| HORVU6Hr1G087920.7 | Barley | mitochondrion | 96.09 | 85.84 |
| GSMUA_Achr10P... | Banana | mitochondrion | 30.92 | 82.2 |
| KXG31353 | Sorghum | cytosol | 82.25 | 81.8 |
| Zm00001d051998_P003 | Maize | cytosol | 81.36 | 80.91 |
| TraesCS7B01G029800.2 | Wheat | cytosol | 77.46 | 79.77 |
| CDX91727 | Canola | mitochondrion | 10.04 | 75.0 |
| GSMUA_Achr3P10470_001 | Banana | cytosol, mitochondrion | 70.98 | 73.7 |
| GSMUA_Achr9P18340_001 | Banana | mitochondrion | 70.65 | 73.35 |
| VIT_01s0026g00310.t01 | Wine grape | mitochondrion | 67.63 | 69.02 |
| KRH69527 | Soybean | mitochondrion | 66.63 | 68.38 |
| KRH74623 | Soybean | mitochondrion | 66.18 | 68.08 |
| CDY59088 | Canola | mitochondrion | 65.07 | 66.86 |
| Bra024627.1-P | Field mustard | mitochondrion | 64.96 | 66.74 |
| AT1G23900.2 | Thale cress | mitochondrion | 65.07 | 66.55 |
| CDY47649 | Canola | mitochondrion | 64.73 | 66.51 |
| CDY25807 | Canola | mitochondrion | 64.84 | 66.4 |
| Bra012393.1-P | Field mustard | mitochondrion | 64.73 | 66.36 |
| CDY28466 | Canola | mitochondrion | 64.62 | 66.25 |
| Solyc04g025870.2.1 | Tomato | plastid | 64.73 | 66.13 |
| KRH45711 | Soybean | cytosol, mitochondrion | 64.73 | 65.83 |
| CDY24514 | Canola | cytosol | 14.73 | 65.35 |
| PGSC0003DMT400010532 | Potato | cytosol, mitochondrion | 63.84 | 65.07 |
| Solyc05g005780.2.1 | Tomato | nucleus | 63.5 | 64.73 |
| AT1G60070.2 | Thale cress | cytosol, mitochondrion | 64.29 | 64.14 |
| CDY33619 | Canola | mitochondrion | 30.25 | 59.56 |
| GSMUA_Achr10P... | Banana | cytosol | 21.54 | 52.59 |
| Bra031528.1-P | Field mustard | mitochondrion | 12.72 | 52.29 |
| KRG99303 | Soybean | nucleus | 7.25 | 36.11 |
| TraesCS4B01G395700.3 | Wheat | cytosol, unclear | 23.44 | 20.17 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 18.64 | 17.52 |
| TraesCS1B01G225600.1 | Wheat | plastid | 15.4 | 14.95 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | MapMan:22.1.2.1 | InterPro:AP1_complex_gsu | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf | InterPro:GAE_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030121 |
| GO:GO:0030131 | InterPro:IPR008153 | InterPro:IPR011989 | PFAM:PF01602 | PFAM:PF02883 | PIRSF:PIRSF037094 |
| PFscan:PS50180 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF27 | SMART:SM00809 | SUPFAM:SSF48371 | SUPFAM:SSF49348 |
| EnsemblPlantsGene:TraesCS6B01G410900 | EnsemblPlants:TraesCS6B01G410900.2 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:684930425..684941913
Molecular Weight (calculated)
97571.3 Da
IEP (calculated)
7.755
GRAVY (calculated)
-0.009
Length
896 amino acids
Sequence
(BLAST)
(BLAST)
001: MALNPFSSGT RLRDMIRAIR ACKTAAEERA VVRRECAAIR AAISGDGQDL RHRNMAKLMF IHMLGYPTHF GQMECLKLIA AAGYPEKRIG YLGLMLLLDE
101: RQEVLMLVTN SLKQDLNHSN QFIVGLALCA LGNICSAEMA RDLAPEVERL MRSRDANTKK KAALCSVRIV RKVPDLAENF MGLAVSLLKE KHHGVLISAV
201: QLCTELCKAS KDALGYLRKN CIEGLVRILR DVSNSSYAPE YDVAGISDPF LHIRVLKLMR MLGQGDADCS DYMNDILAQV ATKTESNKNA GNAILYECVE
301: TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNILMR AITVDAQAVQ RHRVTILECV KDADASIRKR ALELVYLLVN DTNVKPLTKE LVDYLQVADP
401: DFKEDLTAKI CSIAEKFSQE KLWYLDQMFK VLSLAGNHVK DDVWHALIVV ISNASELQGY SVRSLYTALQ AYSEQGSLLR VAVWCIGEYG EMLVNNVGML
501: EAEAPITERR EYYFSMVLLS DIMPSTSTCA DVTTRSMCLV ALLKLSSRFP SMSERIKQIV AQNKENMVLE LQQRSIEFGS IIQRHQSIRS SLLERMPVLD
601: EATYLVKRAS ATQATIPAYK PAAVTPGGLK LPNGVAKPAV APLVDLLDLS SDDAPATSAA SATTAPSDFL QDLLGIGGTN LSTAGAPSSA STDILMDLLS
701: MGSSLSQNGL PSPAQEKKPV SAAPQVGSLV PEPMDLLGSL SSSASISGTK STIAAPQAVD LLDGLSPSTS VSGLEDTRPS ITAFQSATLK ITFDIRKQPG
801: KPQETIIHAT FTNLTSSNYT DFVFQAAVPK FIQLRLDPAS GNIVPANGKG SVTQGFSVTN NQHGQKPLAM RIRMSYKVNG EDRLEQGQVS NFPPGV
101: RQEVLMLVTN SLKQDLNHSN QFIVGLALCA LGNICSAEMA RDLAPEVERL MRSRDANTKK KAALCSVRIV RKVPDLAENF MGLAVSLLKE KHHGVLISAV
201: QLCTELCKAS KDALGYLRKN CIEGLVRILR DVSNSSYAPE YDVAGISDPF LHIRVLKLMR MLGQGDADCS DYMNDILAQV ATKTESNKNA GNAILYECVE
301: TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNILMR AITVDAQAVQ RHRVTILECV KDADASIRKR ALELVYLLVN DTNVKPLTKE LVDYLQVADP
401: DFKEDLTAKI CSIAEKFSQE KLWYLDQMFK VLSLAGNHVK DDVWHALIVV ISNASELQGY SVRSLYTALQ AYSEQGSLLR VAVWCIGEYG EMLVNNVGML
501: EAEAPITERR EYYFSMVLLS DIMPSTSTCA DVTTRSMCLV ALLKLSSRFP SMSERIKQIV AQNKENMVLE LQQRSIEFGS IIQRHQSIRS SLLERMPVLD
601: EATYLVKRAS ATQATIPAYK PAAVTPGGLK LPNGVAKPAV APLVDLLDLS SDDAPATSAA SATTAPSDFL QDLLGIGGTN LSTAGAPSSA STDILMDLLS
701: MGSSLSQNGL PSPAQEKKPV SAAPQVGSLV PEPMDLLGSL SSSASISGTK STIAAPQAVD LLDGLSPSTS VSGLEDTRPS ITAFQSATLK ITFDIRKQPG
801: KPQETIIHAT FTNLTSSNYT DFVFQAAVPK FIQLRLDPAS GNIVPANGKG SVTQGFSVTN NQHGQKPLAM RIRMSYKVNG EDRLEQGQVS NFPPGV
001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
Arabidopsis Description
GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.