Factsheet for GSMUA_Achr9P18340_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	88.88	88.88
GSMUA_Achr10P...	Banana	mitochondrion	33.95	86.94
Os02t0805000-01	Rice	cytosol, plasma membrane	46.0	81.19
CDX91727	Canola	mitochondrion	11.01	79.17
HORVU5Hr1G019420.1	Barley	cytosol	7.65	77.65
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	7.53	76.47
HORVU3Hr1G053020.1	Barley	cytosol	7.53	76.47
HORVU7Hr1G027050.3	Barley	cytosol	76.48	75.95
KXG19397	Sorghum	cytosol, plastid	76.83	75.86
Os06t0167100-01	Rice	plasma membrane	76.25	75.63
TraesCS7A01G129800.3	Wheat	peroxisome	76.25	75.63
TraesCS7D01G128900.2	Wheat	cytosol	76.25	75.63
TraesCS7B01G029800.2	Wheat	cytosol	76.13	75.52
Zm00001d045195_P002	Maize	cytosol	75.78	75.43
Zm00001d036305_P003	Maize	mitochondrion	76.59	72.96
VIT_01s0026g00310.t01	Wine grape	mitochondrion	73.7	72.44
TraesCS6A01G373200.1	Wheat	mitochondrion	74.39	71.97
TraesCS6D01G357400.1	Wheat	golgi	74.28	71.46
KRH74623	Soybean	mitochondrion	71.49	70.84
TraesCS6B01G410900.2	Wheat	cytosol	73.35	70.65
KRH69527	Soybean	mitochondrion	71.26	70.45
KXG31353	Sorghum	cytosol	72.54	69.48
Zm00001d051998_P003	Maize	cytosol	71.84	68.81
Bra024627.1-P	Field mustard	mitochondrion	69.06	68.35
CDY59088	Canola	mitochondrion	69.06	68.35
Solyc05g005780.2.1	Tomato	nucleus	69.52	68.26
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	69.52	68.26
CDY47649	Canola	mitochondrion	68.83	68.12
Solyc04g025870.2.1	Tomato	plastid	69.18	68.07
CDY28466	Canola	mitochondrion	68.83	67.96
AT1G23900.2	Thale cress	mitochondrion	68.83	67.81
CDY25807	Canola	mitochondrion	68.6	67.66
Bra012393.1-P	Field mustard	mitochondrion	68.48	67.62
HORVU3Hr1G040310.1	Barley	cytosol	14.02	67.6
AT1G60070.2	Thale cress	cytosol, mitochondrion	70.22	67.48
CDY24514	Canola	cytosol	15.76	67.33
KRH45711	Soybean	cytosol, mitochondrion	67.44	66.06
HORVU6Hr1G087920.7	Barley	mitochondrion	74.28	63.91
GSMUA_Achr10P...	Banana	cytosol	26.77	62.94
HORVU7Hr1G050510.16	Barley	cytosol	11.59	60.98
CDY33619	Canola	mitochondrion	32.1	60.88
Bra031528.1-P	Field mustard	mitochondrion	12.86	50.92
KRG99303	Soybean	nucleus	8.23	39.44
GSMUA_Achr5P15260_001	Banana	cytosol	5.21	34.35
GSMUA_Achr1P01770_001	Banana	cytosol	24.91	20.98
GSMUA_Achr8P08830_001	Banana	cytosol	18.31	19.17
GSMUA_Achr11P...	Banana	cytosol	19.12	17.72
GSMUA_Achr5P15250_001	Banana	cytosol	19.81	17.22
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	13.33	14.43
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	11.7	14.15

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.2.1	InterPro:AP1_complex_gsu	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:GAE_dom	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030121	GO:GO:0030131	GO:GO:0031410	EnsemblPlantsGene:GSMUA_Achr9G18340_001
EnsemblPlants:GSMUA_Achr9P18340_001	EnsemblPlants:GSMUA_Achr9T18340_001	InterPro:IPR008153	InterPro:IPR011989	UniProt:M0U1E1	PFAM:PF01602
PFAM:PF02883	PIRSF:PIRSF037094	PFscan:PS50180	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809
SUPFAM:SSF48371	SUPFAM:SSF49348	UniParc:UPI00029659F3	SEG:seg	:	:

Description

AP-1 complex subunit gamma-2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G18340_001]

Coordinates

chr9:-:12853535..12876068

Molecular Weight (calculated)

94789.3 Da

IEP (calculated)

6.934

GRAVY (calculated)

-0.080

Length

863 amino acids

Sequence
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECAAIRSA ISENDQDYRH RNIAKLMFIH MLGYPTHFGQ MECLKLIAAS GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY IVGLALCALG NICSAEMARD LAPEVERLLL TRDPNIKKKA ALCSIRIIRK VPDLAENFLS PAASLLKEKH HGVLIAGVQL
201: CTDLCKVSVD ASNYLRKNCT EGLVRILRDI SNSPYAPEYD IAGITDPFLH IRLLRLMRML GQGDSDTSEY INDILAQVAS KTESNKNAGN AILYECVETI
301: MGIEATSGLR VLAINILGRF LSNRDNNIRY VALNMLMKAV AVDSQAVQRH RTTILECVKD SDASIRKRAL ELVFLLVNDT NAKPLTKELI DYLEVSDQDF
401: KGDLTAKICL IVEKFSQEKK WYIDQMFKVL SLGGNFVKDD AWHALIVAIS NAPDLQGYSV RSLYKAFQTS SEQVSLVRVT VWCIGEYGEM LVNNVGVLEV
501: EEPMTVTESD AVDVLEACLT RYSSDIATRS MSLIALLKLS SRFPPTSERI KEIITVHKGS VALELQQRAI EFNSIIQRHQ NIKSSLVERM PVLDESAYIG
601: KRTSSSQANI VADKSSQPSS TATTLKFPNG VAKPPAAPLV DLLDLSADDT SVPSSTSNDF LHDLLGIGLT NSPSSGIAPS GGTDILMDLL SIGTPVQNDT
701: ASKVVSSNQG FAPTTKPVPT TIQVMDLLDG LPSNGSLPGS QTPVYPSITA FESSTLKIMF SFTKQPEKPH VNKIHATFVN LSSDAYTDFV FQAAVPKFVQ
801: LHLDPASSNQ LPASGNGTIT QTLTVTNSQH GQKALAMRVR MVYKVNNQEK SEQGQIDNFP PGL

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.