Factsheet for TraesCS7B01G029800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G128900.2	Wheat	cytosol	97.7	97.7
HORVU7Hr1G027050.3	Barley	cytosol	97.59	97.7
TraesCS7A01G129800.3	Wheat	peroxisome	97.47	97.47
Os06t0167100-01	Rice	plasma membrane	89.2	89.2
KXG19397	Sorghum	cytosol, plastid	88.62	88.22
Zm00001d045195_P002	Maize	cytosol	87.01	87.31
Zm00001d036305_P003	Maize	mitochondrion	88.28	84.77
GSMUA_Achr10P...	Banana	mitochondrion	32.07	82.79
CDX91727	Canola	mitochondrion	10.69	77.5
TraesCS6B01G410900.2	Wheat	cytosol	79.77	77.46
GSMUA_Achr9P18340_001	Banana	mitochondrion	75.52	76.13
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	73.91	74.51
VIT_01s0026g00310.t01	Wine grape	mitochondrion	72.18	71.53
KRH74623	Soybean	mitochondrion	69.31	69.23
KRH69527	Soybean	mitochondrion	69.43	69.19
Solyc04g025870.2.1	Tomato	plastid	68.74	68.19
Solyc05g005780.2.1	Tomato	nucleus	68.39	67.69
CDY59088	Canola	mitochondrion	67.82	67.66
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	68.28	67.58
Bra024627.1-P	Field mustard	mitochondrion	67.7	67.55
CDY28466	Canola	mitochondrion	67.82	67.51
CDY47649	Canola	mitochondrion	67.59	67.43
CDY25807	Canola	mitochondrion	67.82	67.43
AT1G23900.2	Thale cress	mitochondrion	67.82	67.35
Bra012393.1-P	Field mustard	mitochondrion	67.47	67.16
KRH45711	Soybean	cytosol, mitochondrion	67.47	66.63
AT1G60070.2	Thale cress	cytosol, mitochondrion	67.7	65.59
CDY24514	Canola	cytosol	14.48	62.38
CDY33619	Canola	mitochondrion	31.61	60.44
GSMUA_Achr10P...	Banana	cytosol	24.6	58.31
Bra031528.1-P	Field mustard	mitochondrion	12.41	49.54
KRG99303	Soybean	nucleus	7.93	38.33
TraesCS4B01G395700.3	Wheat	cytosol, unclear	24.48	20.46
TraesCS3B01G457300.1	Wheat	cytosol, nucleus, plastid	19.77	18.05
TraesCS1B01G225600.1	Wheat	plastid	15.75	14.84

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.2.1	InterPro:AP1_complex_gsu	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:GAE_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030121
GO:GO:0030131	InterPro:IPR008153	InterPro:IPR011989	PFAM:PF01602	PFAM:PF02883	PIRSF:PIRSF037094
PFscan:PS50180	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809	SUPFAM:SSF48371	SUPFAM:SSF49348
EnsemblPlantsGene:TraesCS7B01G029800	EnsemblPlants:TraesCS7B01G029800.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:28494653..28503081

Molecular Weight (calculated)

95090.8 Da

IEP (calculated)

7.172

GRAVY (calculated)

-0.043

Length

870 amino acids

Sequence
(BLAST)

001: MDLSLNPFSS GTRLRDMIRA IRASKTAAEE RAVVRRECAA IRAAISENDQ DYRHRNMAKL MFIHMLGYPT HFGQMECLKL IAASGFPEKR IGYLGLTLLL
101: DERQEVLMLV TNSLKQDLNH SNQFIVGLAL CALGNICSAE MARDLAPEVE RLLQTRDANT KKKAALCSIR IVRKVPDLAE NFMGSAASLL KEKHHGVLIS
201: VVQLCTELCK ASREALEYLR KHSVEGLVRI LRDVSNSSYA PEYDIAGITD PFLHIRVLRL MRTLGQGDAD CSEHVNDILA QVATKTESNK NAGNAILYEC
301: VETIMGIEAT SGLRVLAINI LGRFLSNRDN NIRYVALNML MKAMAVDTLA VQRHRVTILE CVKDADVSIR KRALELVYLL VNDTNVKPLT KELVDYLQVS
401: DDDFKEDLTA KICSIVEKFS QDKLWYLDQM FKVLTLTGNF VKDDVWHSLI VLISNASELQ GYSVRSLYKA LQACGTQESL VRVAVWCIGE YGEMLVNNIS
501: MLDVEEPITV TESDAVDALE LALKRYSVDV TTRAMCLVAL LKLSSRFPPT SKRIQVIVAQ NKGNTVLELQ QRSIEFNSII QRHQSIKSSL LERMPVLDEA
601: NYLLKRAASS QATVSLTKSA PSAASGGSLK VPNGAVKPPP APLADLLDLS SDDAPVTTSA PSTAPNDFLQ DLLGIGLIDT STAGGAPSAS TDILMDLLSI
701: GSYPVQNGPP ATSNITSPDQ AVTKHAPGTP QVIDLLDGLS ASTPLPDVNA AYPSITAFQS ATLKITFNFK KQPGKPQETT VHASFTNLTS ATLTNFMFQA
801: AVPKFIQLRL DPASSSTLPA SGNGSVTQSL SVTNNQHGQK PLAMRIRISY KVNGEDRLEQ GQISNFPAGL

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.