CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G019420.1	Barley	cytosol	28.22	67.06
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	27.72	65.88
HORVU3Hr1G053020.1	Barley	cytosol	27.23	64.71
Bra031528.1-P	Field mustard	mitochondrion	64.36	59.63
HORVU7Hr1G050510.16	Barley	cytosol	28.71	35.37
HORVU3Hr1G040310.1	Barley	cytosol	31.19	35.2
CDY33619	Canola	mitochondrion	67.33	29.89
Os02t0805000-01	Rice	cytosol, plasma membrane	59.9	24.74
AT1G60070.2	Thale cress	cytosol, mitochondrion	80.2	18.04
VIT_01s0026g00310.t01	Wine grape	mitochondrion	73.27	16.86
KRH74623	Soybean	mitochondrion	72.28	16.76
Solyc04g025870.2.1	Tomato	plastid	71.29	16.42
KRH69527	Soybean	mitochondrion	70.79	16.38
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	69.31	16.22
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	70.3	16.15
KRH45711	Soybean	cytosol, mitochondrion	70.3	16.12
Solyc05g005780.2.1	Tomato	nucleus	69.8	16.04
GSMUA_Achr9P18340_001	Banana	mitochondrion	67.33	15.76
CDY59088	Canola	mitochondrion	67.82	15.71
CDY28466	Canola	mitochondrion	67.82	15.68
CDY47649	Canola	mitochondrion	67.33	15.6
CDY25807	Canola	mitochondrion	66.83	15.43
HORVU7Hr1G027050.3	Barley	cytosol	64.36	14.96
TraesCS7D01G128900.2	Wheat	cytosol	64.36	14.94
TraesCS7A01G129800.3	Wheat	peroxisome	64.36	14.94
Os06t0167100-01	Rice	plasma membrane	64.36	14.94
Zm00001d045195_P002	Maize	cytosol	63.86	14.88
TraesCS6A01G373200.1	Wheat	mitochondrion	65.35	14.8
KXG19397	Sorghum	cytosol, plastid	63.86	14.76
TraesCS6B01G410900.2	Wheat	cytosol	65.35	14.73
TraesCS7B01G029800.2	Wheat	cytosol	62.38	14.48
Zm00001d036305_P003	Maize	mitochondrion	64.36	14.35
TraesCS6D01G357400.1	Wheat	golgi	63.37	14.27
Zm00001d051998_P003	Maize	cytosol	62.87	14.1
KXG31353	Sorghum	cytosol	62.38	13.98
HORVU6Hr1G087920.7	Barley	mitochondrion	65.35	13.16
GSMUA_Achr10P...	Banana	mitochondrion	16.34	9.79
CDY70074	Canola	cytosol	24.26	7.75
CDY20344	Canola	cytosol	18.81	5.89
CDX84997	Canola	cytosol	25.25	5.86
CDX92339	Canola	cytosol	29.21	5.86
CDY26951	Canola	cytosol	29.21	5.85
CDY42099	Canola	cytosol	26.24	5.61
CDY04318	Canola	cytosol, nucleus, plastid	18.81	4.73
CDY24454	Canola	cytosol	19.31	4.57
CDX92225	Canola	cytosol, nucleus, plastid	18.81	4.44
CDY68338	Canola	nucleus	17.82	4.24
CDY29719	Canola	cytosol	19.8	4.08
GSMUA_Achr10P...	Banana	cytosol	4.46	2.45
CDY20343	Canola	cytosol	2.48	1.6
CDX91727	Canola	mitochondrion	0.5	0.83
KRG99303	Soybean	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078GGS8	UniProt:A0A078GGS8	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY24514	ProteinID:CDY24514	ProteinID:CDY24514.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	EnsemblPlantsGene:GSBRNA2T00026821001
InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI0004EEA525

Description

BnaA01g22180DBnaA01g22180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGS8]

Coordinates

chrLK032160:-:258577..262251

Molecular Weight (calculated)

22872.9 Da

IEP (calculated)

6.516

GRAVY (calculated)

0.136

Length

202 amino acids

Sequence
(BLAST)

001: MQNAILYECV QTIMSIEENG GLRVLAINIL GKFLSNRDNN IRFLSTVLVS EALTVDSKAV QRHRATILEC VKDSDASIQR RALELIYLLV NVNNVKPLAK
101: ELIEYLEVRE QDFKGVLTAK ICSIERSKFA PEKIWYIDQM LKVLSEAGNY VKDDVWHALI VVITNAPDLH GRTNYGDYAF LTSSKMLTLV VNHDLATYLL
201: VV

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.