CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91727	Canola	mitochondrion	37.22	55.83
GSMUA_Achr10P...	Banana	mitochondrion	38.89	20.77
Os02t0805000-01	Rice	cytosol, plasma membrane	36.11	13.29
KRH45711	Soybean	cytosol, mitochondrion	42.78	8.74
KRH74623	Soybean	mitochondrion	41.67	8.61
KRH69527	Soybean	mitochondrion	41.11	8.48
Solyc04g025870.2.1	Tomato	plastid	41.11	8.44
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	40.56	8.3
Solyc05g005780.2.1	Tomato	nucleus	40.56	8.3
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	39.44	8.23
GSMUA_Achr9P18340_001	Banana	mitochondrion	39.44	8.23
AT1G23900.2	Thale cress	mitochondrion	40.0	8.22
CDY28466	Canola	mitochondrion	39.44	8.12
Bra012393.1-P	Field mustard	mitochondrion	39.44	8.12
CDY25807	Canola	mitochondrion	39.44	8.11
VIT_01s0026g00310.t01	Wine grape	mitochondrion	39.44	8.09
HORVU7Hr1G027050.3	Barley	cytosol	38.89	8.06
Zm00001d045195_P002	Maize	cytosol	38.33	7.96
Zm00001d036305_P003	Maize	mitochondrion	40.0	7.95
Os06t0167100-01	Rice	plasma membrane	38.33	7.93
TraesCS7B01G029800.2	Wheat	cytosol	38.33	7.93
AT1G60070.2	Thale cress	cytosol, mitochondrion	39.44	7.91
KXG19397	Sorghum	cytosol, plastid	38.33	7.89
TraesCS7A01G129800.3	Wheat	peroxisome	37.78	7.82
TraesCS7D01G128900.2	Wheat	cytosol	37.78	7.82
CDY59088	Canola	mitochondrion	37.78	7.8
CDY47649	Canola	mitochondrion	37.78	7.8
Bra024627.1-P	Field mustard	mitochondrion	37.78	7.8
TraesCS6B01G410900.2	Wheat	cytosol	36.11	7.25
TraesCS6D01G357400.1	Wheat	golgi	36.11	7.25
TraesCS6A01G373200.1	Wheat	mitochondrion	35.56	7.17
Zm00001d051998_P003	Maize	cytosol	35.0	6.99
KXG31353	Sorghum	cytosol	33.89	6.77
HORVU6Hr1G087920.7	Barley	mitochondrion	36.67	6.58
KRH25154	Soybean	cytosol	6.67	2.95
KRH26563	Soybean	endoplasmic reticulum	16.67	2.94
KRH22743	Soybean	cytosol, endoplasmic reticulum	16.67	2.94
KRH07767	Soybean	nucleus	11.67	2.14
KRH07246	Soybean	nucleus	11.67	2.14
KRH76456	Soybean	nucleus	11.11	2.07
KRH39774	Soybean	nucleus	11.67	2.04
HORVU7Hr1G050510.16	Barley	cytosol	1.67	1.83
KRH60392	Soybean	cytosol	8.89	1.64
KRH41691	Soybean	cytosol	7.78	1.53
HORVU3Hr1G040310.1	Barley	cytosol	1.11	1.12
CDY33619	Canola	mitochondrion	1.67	0.66
HORVU5Hr1G019420.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G053020.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	0.0	0.0
GSMUA_Achr10P...	Banana	cytosol	0.0	0.0
CDY24514	Canola	cytosol	0.0	0.0
Bra031528.1-P	Field mustard	mitochondrion	0.0	0.0

Protein Annotations

EMBL:ACUP02011028	EnsemblPlants:KRG99303	EnsemblPlantsGene:GLYMA_18G135400	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	ProteinID:KRG99303
ProteinID:KRG99303.1	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000295DF64	UniProt:K7MRX6	MapMan:35.1

Description

hypothetical protein

Coordinates

chr18:-:19656826..19673032

Molecular Weight (calculated)

20760.8 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.534

Length

180 amino acids

Sequence
(BLAST)

001: MAAGYTNTNS ISKHRDLFYF IFLFFISFSE KNSDSIEAKQ NKSKQLSHNA LHCDCCNWKK EKEKFQRLTQ QTPLSDPNRF PLSDPNSVKL DPLEFPNMNP
101: FSSPSRLRDM IQAIRACKTA AEERAVVRKE CATIHAAIDE NDPDYRHWNL AKLMFIHMLG YPTHFGQMEC LKLIASPGFP

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.