Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G373200.1 | Wheat | mitochondrion | 97.55 | 98.09 |
| TraesCS6B01G410900.2 | Wheat | cytosol | 95.54 | 95.65 |
| Os02t0805000-01 | Rice | cytosol, plasma membrane | 48.38 | 88.75 |
| HORVU6Hr1G087920.7 | Barley | mitochondrion | 97.55 | 87.24 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.1 | 82.79 |
| KXG31353 | Sorghum | cytosol | 82.83 | 82.46 |
| Zm00001d051998_P003 | Maize | cytosol | 82.16 | 81.8 |
| TraesCS7D01G128900.2 | Wheat | cytosol | 78.15 | 80.57 |
| CDX91727 | Canola | mitochondrion | 10.03 | 75.0 |
| GSMUA_Achr9P18340_001 | Banana | mitochondrion | 71.46 | 74.28 |
| GSMUA_Achr3P10470_001 | Banana | cytosol, mitochondrion | 71.24 | 74.04 |
| VIT_01s0026g00310.t01 | Wine grape | mitochondrion | 68.12 | 69.59 |
| KRH69527 | Soybean | mitochondrion | 66.78 | 68.61 |
| KRH74623 | Soybean | mitochondrion | 66.44 | 68.43 |
| CDY59088 | Canola | mitochondrion | 65.66 | 67.55 |
| Bra024627.1-P | Field mustard | mitochondrion | 65.55 | 67.43 |
| AT1G23900.2 | Thale cress | mitochondrion | 65.77 | 67.35 |
| CDY47649 | Canola | mitochondrion | 65.33 | 67.2 |
| Solyc04g025870.2.1 | Tomato | plastid | 65.44 | 66.93 |
| CDY25807 | Canola | mitochondrion | 65.22 | 66.86 |
| CDY28466 | Canola | mitochondrion | 64.99 | 66.7 |
| Bra012393.1-P | Field mustard | mitochondrion | 64.88 | 66.59 |
| KRH45711 | Soybean | cytosol, mitochondrion | 64.88 | 66.06 |
| PGSC0003DMT400010532 | Potato | cytosol, mitochondrion | 64.44 | 65.76 |
| Solyc05g005780.2.1 | Tomato | nucleus | 63.88 | 65.19 |
| AT1G60070.2 | Thale cress | cytosol, mitochondrion | 64.66 | 64.59 |
| CDY24514 | Canola | cytosol | 14.27 | 63.37 |
| CDY33619 | Canola | mitochondrion | 30.1 | 59.34 |
| GSMUA_Achr10P... | Banana | cytosol | 22.41 | 54.77 |
| Bra031528.1-P | Field mustard | mitochondrion | 12.37 | 50.92 |
| KRG99303 | Soybean | nucleus | 7.25 | 36.11 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 18.17 | 17.1 |
| TraesCS1D01G215000.1 | Wheat | cytosol, plastid | 15.5 | 15.06 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | MapMan:22.1.2.1 | InterPro:AP1_complex_gsu | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf | InterPro:GAE_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030121 |
| GO:GO:0030131 | InterPro:IPR008153 | InterPro:IPR011989 | PFAM:PF01602 | PFAM:PF02883 | PIRSF:PIRSF037094 |
| PFscan:PS50180 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF27 | SMART:SM00809 | SUPFAM:SSF48371 | SUPFAM:SSF49348 |
| EnsemblPlantsGene:TraesCS6D01G357400 | EnsemblPlants:TraesCS6D01G357400.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:-:451036141..451048980
Molecular Weight (calculated)
96792.1 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.020
Length
897 amino acids
Sequence
(BLAST)
(BLAST)
001: MALNPFSSGT RLRDMIRAIR ACKTAAEERA VVRRECAAIR AAISGDGQDL RHRNMAKLMF IHMLGYPTHF GQMECLKLIA AAGYPEKRIG YLGLMLLLDE
101: RQEVLMLVTN SLKQDLNHSN QFIVGLALCA LGNICSAEMA RDLAPEVERL MRSRDANTKK KAALCSVRIV RKVPDLAENF MGLAASLLKE KHHGVLISAV
201: QLCTELCKAS KDALEYLRKN CIEGLVRILR DVSNSSYAPE YDVAGISDPF LHIRVLKLMR MLGQGDADCS DYMNDILAQV ATKTESNKNA GNAILYECVE
301: TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNILMR AITVDAQAVQ RHRVTILECV KDADASIRKR ALDLVYLLVN DTNVKPLTKE LVDYLQVADP
401: DFKEDLTAKI CXXXXXFSQE KLWYLDQMFK VLSLAGNHVK DDVWHALIVV ISNASELQGY SVRSLYTALQ AYSEQGSLLR VAVWCIGEYG EMLVNNVAML
501: EAEGPITVTE SDAVDAVELG LNRYSPDVTT RSMCLVALLK LSSRFPSMSE RIKQIVSQNK ENMVLELQQR SIEFGSIIQR HQSIRSSLLE RMPVLDEAAY
601: LVKRASATQA TIPAYKPAAV TPGGLKLPNG VAKPAAAPLV DLLDLSSDDA PVTSAASATT APSDFLQDLL GIGGTNLSTA GAPSSASTDI LMDLLSMGSS
701: PSQNGLPSPG LSSPALEKKP VSAAPQVGSL VPEPMDLLGS LSSSASVSGT KSTIAAPQAV DLLDGLSPST SVSGLEDTRP SITAFQSATL KITFDIRKQP
801: GKPQETTIHA TFTNLTSSNY TDFIFQAAVP KFIQLRLDPA SGNIVPANGK GSVTQGFSVT NNQHGQKPLA MRIRMSYKVN GEDRLEQGQV SNFPPGV
101: RQEVLMLVTN SLKQDLNHSN QFIVGLALCA LGNICSAEMA RDLAPEVERL MRSRDANTKK KAALCSVRIV RKVPDLAENF MGLAASLLKE KHHGVLISAV
201: QLCTELCKAS KDALEYLRKN CIEGLVRILR DVSNSSYAPE YDVAGISDPF LHIRVLKLMR MLGQGDADCS DYMNDILAQV ATKTESNKNA GNAILYECVE
301: TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNILMR AITVDAQAVQ RHRVTILECV KDADASIRKR ALDLVYLLVN DTNVKPLTKE LVDYLQVADP
401: DFKEDLTAKI CXXXXXFSQE KLWYLDQMFK VLSLAGNHVK DDVWHALIVV ISNASELQGY SVRSLYTALQ AYSEQGSLLR VAVWCIGEYG EMLVNNVAML
501: EAEGPITVTE SDAVDAVELG LNRYSPDVTT RSMCLVALLK LSSRFPSMSE RIKQIVSQNK ENMVLELQQR SIEFGSIIQR HQSIRSSLLE RMPVLDEAAY
601: LVKRASATQA TIPAYKPAAV TPGGLKLPNG VAKPAAAPLV DLLDLSSDDA PVTSAASATT APSDFLQDLL GIGGTNLSTA GAPSSASTDI LMDLLSMGSS
701: PSQNGLPSPG LSSPALEKKP VSAAPQVGSL VPEPMDLLGS LSSSASVSGT KSTIAAPQAV DLLDGLSPST SVSGLEDTRP SITAFQSATL KITFDIRKQP
801: GKPQETTIHA TFTNLTSSNY TDFIFQAAVP KFIQLRLDPA SGNIVPANGK GSVTQGFSVT NNQHGQKPLA MRIRMSYKVN GEDRLEQGQV SNFPPGV
001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
Arabidopsis Description
GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.