Factsheet for GSMUA_Achr10P01890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
plasma membrane 1
cytosol 2
nucleus 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91727	Canola	mitochondrion	27.0	75.83
Os02t0805000-01	Rice	cytosol, plasma membrane	80.42	55.42
KRG99303	Soybean	nucleus	20.77	38.89
GSMUA_Achr9P18340_001	Banana	mitochondrion	86.94	33.95
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	86.65	33.84
GSMUA_Achr5P15260_001	Banana	cytosol	13.06	33.59
KXG19397	Sorghum	cytosol, plastid	83.68	32.27
HORVU7Hr1G027050.3	Barley	cytosol	82.79	32.11
TraesCS7B01G029800.2	Wheat	cytosol	82.79	32.07
Os06t0167100-01	Rice	plasma membrane	82.79	32.07
TraesCS7D01G128900.2	Wheat	cytosol	82.49	31.95
TraesCS7A01G129800.3	Wheat	peroxisome	82.49	31.95
Zm00001d045195_P002	Maize	cytosol	82.2	31.95
TraesCS6A01G373200.1	Wheat	mitochondrion	82.49	31.17
Zm00001d036305_P003	Maize	mitochondrion	83.68	31.13
TraesCS6D01G357400.1	Wheat	golgi	82.79	31.1
VIT_01s0026g00310.t01	Wine grape	mitochondrion	81.01	31.09
KRH69527	Soybean	mitochondrion	80.42	31.04
KRH74623	Soybean	mitochondrion	80.12	31.0
TraesCS6B01G410900.2	Wheat	cytosol	82.2	30.92
Solyc04g025870.2.1	Tomato	plastid	79.82	30.67
AT1G23900.2	Thale cress	mitochondrion	78.34	30.14
Zm00001d051998_P003	Maize	cytosol	80.42	30.08
Bra012393.1-P	Field mustard	mitochondrion	77.45	29.86
KXG31353	Sorghum	cytosol	79.82	29.86
CDY25807	Canola	mitochondrion	77.45	29.83
CDY47649	Canola	mitochondrion	77.15	29.82
AT1G60070.2	Thale cress	cytosol, mitochondrion	79.23	29.73
Bra024627.1-P	Field mustard	mitochondrion	76.85	29.7
CDY59088	Canola	mitochondrion	76.85	29.7
CDY28466	Canola	mitochondrion	76.56	29.52
KRH45711	Soybean	cytosol, mitochondrion	76.56	29.28
Solyc05g005780.2.1	Tomato	nucleus	76.26	29.24
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	75.96	29.12
HORVU6Hr1G087920.7	Barley	mitochondrion	83.09	27.92
HORVU3Hr1G040310.1	Barley	cytosol	13.65	25.7
HORVU7Hr1G050510.16	Barley	cytosol	8.01	16.46
CDY24514	Canola	cytosol	9.79	16.34
CDY33619	Canola	mitochondrion	19.58	14.51
GSMUA_Achr8P08830_001	Banana	cytosol	25.22	10.32
GSMUA_Achr1P01770_001	Banana	cytosol	29.67	9.76
GSMUA_Achr11P...	Banana	cytosol	24.93	9.02
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	13.06	6.16
GSMUA_Achr5P15250_001	Banana	cytosol	16.32	5.54
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	13.06	5.52
GSMUA_Achr10P...	Banana	cytosol	1.19	1.09
HORVU3Hr1G053020.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G019420.1	Barley	cytosol	0.0	0.0
Bra031528.1-P	Field mustard	mitochondrion	0.0	0.0
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117
EnsemblPlantsGene:GSMUA_Achr10G01890_001	EnsemblPlants:GSMUA_Achr10P01890_001	EnsemblPlants:GSMUA_Achr10T01890_001	InterPro:IPR011989	UniProt:M0REL6	PFAM:PF01602
PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI00029550AB	:	:

Description

AP-1 complex subunit gamma-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G01890_001]

Coordinates

chr10:+:4383823..4401429

Molecular Weight (calculated)

37765.5 Da

IEP (calculated)

8.402

GRAVY (calculated)

0.096

Length

337 amino acids

Sequence
(BLAST)

001: MNPFSSPTRL RDMIRAIRAC KTAAEERAVV RKECAAIRSA ISENDQFYRH RNLAKLMFIH MLGYPTHFGQ LECLKLIAAV DFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY IVGLALCALG NICSAEMAMD LAPEVERLLL SRDQTIKKKA ALCSIRIIRK VSDLAENLMS PAASLLKEKH HGVLIAGVQL
201: CTDLCKVSAS VLEYLRKTCI ERLIRILKDI SNSSYSLEYD IAGTVDPFLH IRVLKLMRIL GQGDADSSEY MIDILAQVAS KTESKKNAGN AVLYECVETI
301: MGIEATSGLR VLAVNILGRF LSNHDNNIRS YIINFFQ

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.