Factsheet for HORVU7Hr1G050510.16

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G019420.1	Barley	cytosol	51.83	100.0
HORVU3Hr1G053020.1	Barley	cytosol	49.39	95.29
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	48.17	92.94
HORVU3Hr1G040310.1	Barley	cytosol	50.0	45.81
CDY24514	Canola	cytosol	35.37	28.71
Bra031528.1-P	Field mustard	mitochondrion	35.98	27.06
Os02t0805000-01	Rice	cytosol, plasma membrane	68.9	23.11
CDY33619	Canola	mitochondrion	42.68	15.38
HORVU7Hr1G027050.3	Barley	cytosol	65.85	12.43
Zm00001d051998_P003	Maize	cytosol	65.24	11.88
KXG31353	Sorghum	cytosol	65.24	11.88
HORVU6Hr1G087920.7	Barley	mitochondrion	72.56	11.86
VIT_01s0026g00310.t01	Wine grape	mitochondrion	62.2	11.62
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	60.98	11.59
GSMUA_Achr9P18340_001	Banana	mitochondrion	60.98	11.59
CDY59088	Canola	mitochondrion	60.98	11.47
CDY47649	Canola	mitochondrion	60.98	11.47
Bra024627.1-P	Field mustard	mitochondrion	60.98	11.47
Bra012393.1-P	Field mustard	mitochondrion	60.98	11.44
CDY28466	Canola	mitochondrion	60.98	11.44
CDY25807	Canola	mitochondrion	60.98	11.43
AT1G23900.2	Thale cress	mitochondrion	60.98	11.42
KRH69527	Soybean	mitochondrion	60.37	11.34
Solyc04g025870.2.1	Tomato	plastid	59.76	11.17
KRH74623	Soybean	mitochondrion	59.15	11.14
KRH45711	Soybean	cytosol, mitochondrion	59.76	11.12
AT1G60070.2	Thale cress	cytosol, mitochondrion	59.76	10.91
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	56.71	10.58
Solyc05g005780.2.1	Tomato	nucleus	56.71	10.58
GSMUA_Achr10P...	Banana	mitochondrion	16.46	8.01
CDX91727	Canola	mitochondrion	3.66	5.0
HORVU4Hr1G089310.1	Barley	cytosol	31.1	4.8
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	21.95	3.74
HORVU1Hr1G054180.2	Barley	cytosol, plastid	21.34	3.69
KRG99303	Soybean	nucleus	1.83	1.67
GSMUA_Achr10P...	Banana	cytosol	0.61	0.27

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A287WFY1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	EnsemblPlantsGene:HORVU7Hr1G050510	EnsemblPlants:HORVU7Hr1G050510.16	InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22780
PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI000B477B7A	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:+:182634889..182638268

Molecular Weight (calculated)

17902.7 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.184

Length

164 amino acids

Sequence
(BLAST)

001: AEPARRAGQA LCQPRQGPLR CDAALPDGPG GGGHLISSPD LDPGDNVRSL CKAVACGKGN CVVTEVCRKD SRYVALNILM RAITVDTQAV QRHRVSILEC
101: VKDADASIRK RALELVYLLV NDTNVKLLTK ELVDYLQVAD PDFKEDLTAK ICSIAKKFSQ EKLW

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.