CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24514	Canola	cytosol	29.89	67.33
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	12.31	65.88
HORVU5Hr1G019420.1	Barley	cytosol	12.09	64.71
HORVU3Hr1G053020.1	Barley	cytosol	11.87	63.53
HORVU3Hr1G040310.1	Barley	cytosol	20.88	53.07
HORVU7Hr1G050510.16	Barley	cytosol	15.38	42.68
AT1G60070.2	Thale cress	cytosol, mitochondrion	77.14	39.09
KRH69527	Soybean	mitochondrion	66.81	34.82
Os02t0805000-01	Rice	cytosol, plasma membrane	37.14	34.56
KRH74623	Soybean	mitochondrion	66.15	34.56
VIT_01s0026g00310.t01	Wine grape	mitochondrion	66.37	34.4
CDY59088	Canola	mitochondrion	65.49	34.17
CDY47649	Canola	mitochondrion	65.05	33.95
CDY28466	Canola	mitochondrion	65.05	33.87
CDY25807	Canola	mitochondrion	64.84	33.71
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	64.84	33.56
Solyc05g005780.2.1	Tomato	nucleus	64.4	33.33
Solyc04g025870.2.1	Tomato	plastid	64.18	33.3
KRH45711	Soybean	cytosol, mitochondrion	63.08	32.58
GSMUA_Achr9P18340_001	Banana	mitochondrion	60.88	32.1
Os06t0167100-01	Rice	plasma membrane	61.32	32.07
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	60.66	31.98
TraesCS7D01G128900.2	Wheat	cytosol	61.1	31.95
TraesCS7A01G129800.3	Wheat	peroxisome	60.88	31.84
HORVU7Hr1G027050.3	Barley	cytosol	60.66	31.76
Zm00001d045195_P002	Maize	cytosol	60.44	31.72
TraesCS7B01G029800.2	Wheat	cytosol	60.44	31.61
KXG19397	Sorghum	cytosol, plastid	60.66	31.58
TraesCS6A01G373200.1	Wheat	mitochondrion	60.88	31.05
Zm00001d036305_P003	Maize	mitochondrion	60.44	30.35
TraesCS6B01G410900.2	Wheat	cytosol	59.56	30.25
TraesCS6D01G357400.1	Wheat	golgi	59.34	30.1
KXG31353	Sorghum	cytosol	58.46	29.52
Zm00001d051998_P003	Maize	cytosol	58.24	29.41
HORVU6Hr1G087920.7	Barley	mitochondrion	60.66	27.52
GSMUA_Achr10P...	Banana	cytosol	18.24	22.62
GSMUA_Achr10P...	Banana	mitochondrion	14.51	19.58
CDY70074	Canola	cytosol	17.36	12.5
CDY20344	Canola	cytosol	15.16	10.7
CDX84997	Canola	cytosol	19.12	10.0
CDX92339	Canola	cytosol	21.54	9.73
CDY26951	Canola	cytosol	21.54	9.72
CDY42099	Canola	cytosol	19.78	9.53
CDY29719	Canola	cytosol	18.02	8.36
CDY24454	Canola	cytosol	14.07	7.49
CDX92225	Canola	cytosol, nucleus, plastid	13.85	7.36
CDY04318	Canola	cytosol, nucleus, plastid	12.75	7.22
CDY68338	Canola	nucleus	12.97	6.94
CDY20343	Canola	cytosol	3.96	5.77
CDX91727	Canola	mitochondrion	1.1	4.17
KRG99303	Soybean	nucleus	0.66	1.67

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.2.1	GO:A0A078H816	UniProt:A0A078H816	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY33619	ProteinID:CDY33619	ProteinID:CDY33619.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	EnsemblPlantsGene:GSBRNA2T00054952001
InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI0004EF45CD
SEG:seg	:	:	:	:	:

Description

BnaC01g28500DBnaC01g28500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H816]

Coordinates

chrLK032318:-:412896..419646

Molecular Weight (calculated)

50416.2 Da

IEP (calculated)

8.554

GRAVY (calculated)

-0.023

Length

455 amino acids

Sequence
(BLAST)

001: MTRVSGPTPR PNHSRRPVRT GHIRLTSILG SNTAYDVAGI TDPFLHVRLL ILLRILGRGD AEASDLMNDI LAQVASKTES NKNAGNAIAY ECVQTIMSIE
101: ENDNNIRYVA LNMLMRALTV DSIAVQRHRA TILECVKDSV ASIQRRALEL IYLLMNVNNV KPLAKELIEY LELSEQDFTG DLTAKIYSIV EKFAPEKIWY
201: IDQMVKVLSE AGNYVKDDVW HVLIVVISNA PDLHGYTVRA LYRALHTSSE QETIERVAIW RIGEYADLLV NDNGMLELKE PITVTESDAV DVFETAVKHH
301: SSDVTTKAMA LIALLKISSR FPFSRLIMRV KSIIGQNKVI QKHQNIRSSL VEKMPVLDEA TFSGRRAGSL PIAVSTSGKS SLSIPNGVVK AAAPLVDLLD
401: LSSDDAPAPT SFSANCVGLK SQKKKSQKKM LVFCLTPSFE SLLQKAQKSI EYNII

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.