Factsheet for GSMUA_Achr3P10470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
plasma membrane 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P18340_001	Banana	mitochondrion	88.88	88.88
GSMUA_Achr10P...	Banana	mitochondrion	33.84	86.65
Os02t0805000-01	Rice	cytosol, plasma membrane	45.42	80.16
HORVU5Hr1G019420.1	Barley	cytosol	7.88	80.0
CDX91727	Canola	mitochondrion	11.12	80.0
HORVU3Hr1G053020.1	Barley	cytosol	7.76	78.82
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	7.76	78.82
Os06t0167100-01	Rice	plasma membrane	76.01	75.4
KXG19397	Sorghum	cytosol, plastid	76.36	75.4
Zm00001d045195_P002	Maize	cytosol	75.2	74.86
HORVU7Hr1G027050.3	Barley	cytosol	75.09	74.57
TraesCS7D01G128900.2	Wheat	cytosol	74.62	74.02
TraesCS7A01G129800.3	Wheat	peroxisome	74.62	74.02
TraesCS7B01G029800.2	Wheat	cytosol	74.51	73.91
Zm00001d036305_P003	Maize	mitochondrion	76.13	72.52
VIT_01s0026g00310.t01	Wine grape	mitochondrion	73.12	71.87
TraesCS6A01G373200.1	Wheat	mitochondrion	74.28	71.86
TraesCS6D01G357400.1	Wheat	golgi	74.04	71.24
TraesCS6B01G410900.2	Wheat	cytosol	73.7	70.98
HORVU3Hr1G040310.1	Barley	cytosol	14.6	70.39
KRH74623	Soybean	mitochondrion	70.92	70.26
KRH69527	Soybean	mitochondrion	70.8	69.99
KXG31353	Sorghum	cytosol	72.42	69.37
CDY24514	Canola	cytosol	16.22	69.31
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	70.45	69.17
Solyc05g005780.2.1	Tomato	nucleus	70.34	69.06
Solyc04g025870.2.1	Tomato	plastid	70.1	68.99
Zm00001d051998_P003	Maize	cytosol	71.96	68.92
Bra024627.1-P	Field mustard	mitochondrion	68.95	68.23
CDY47649	Canola	mitochondrion	68.95	68.23
CDY59088	Canola	mitochondrion	68.95	68.23
CDY28466	Canola	mitochondrion	68.95	68.08
CDY25807	Canola	mitochondrion	68.95	68.0
Bra012393.1-P	Field mustard	mitochondrion	68.83	67.96
AT1G23900.2	Thale cress	mitochondrion	68.48	67.47
AT1G60070.2	Thale cress	cytosol, mitochondrion	69.64	66.93
KRH45711	Soybean	cytosol, mitochondrion	67.44	66.06
HORVU6Hr1G087920.7	Barley	mitochondrion	74.39	64.01
GSMUA_Achr10P...	Banana	cytosol	26.65	62.67
HORVU7Hr1G050510.16	Barley	cytosol	11.59	60.98
CDY33619	Canola	mitochondrion	31.98	60.66
Bra031528.1-P	Field mustard	mitochondrion	13.56	53.67
KRG99303	Soybean	nucleus	8.23	39.44
GSMUA_Achr5P15260_001	Banana	cytosol	4.98	32.82
GSMUA_Achr1P01770_001	Banana	cytosol	24.45	20.59
GSMUA_Achr8P08830_001	Banana	cytosol	18.31	19.17
GSMUA_Achr11P...	Banana	cytosol	19.58	18.15
GSMUA_Achr5P15250_001	Banana	cytosol	19.35	16.82
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	13.09	14.18
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	11.59	14.01

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.2.1	InterPro:AP1_complex_gsu	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:GAE_dom	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030121	GO:GO:0030131	GO:GO:0031410	EnsemblPlantsGene:GSMUA_Achr3G10470_001
EnsemblPlants:GSMUA_Achr3P10470_001	EnsemblPlants:GSMUA_Achr3T10470_001	InterPro:IPR008153	InterPro:IPR011989	UniProt:M0SDG4	PFAM:PF01602
PFAM:PF02883	PIRSF:PIRSF037094	PFscan:PS50180	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809
SUPFAM:SSF48371	SUPFAM:SSF49348	UniParc:UPI0002969E50	SEG:seg	:	:

Description

AP-1 complex subunit gamma-2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G10470_001]

Coordinates

chr3:-:7583465..7609474

Molecular Weight (calculated)

94920.8 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.048

Length

863 amino acids

Sequence
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECAAIRSA ISEHDQDYRH RNIAKLMFIH MLGYPTHFGQ MECLKLIASA GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMASD LAAEVERLLL TKDPNIKKKA ALCSIRIIRK VPDLAENFLS PAASLLKEKH HGVLIAGIQL
201: CTDLCKVSAD ANKHLRKNCT EGLIRILKDV SNSSYAPEYD IAGITDPFLH IRVLRLMRML GQGDADTSEY MNDILAQIAS KTESNKNAGN AILYECVETI
301: MGIEATSGLR VLAINILGRF LSNRDNNIRY VALNMLMKAI AVDSQAVQRH RTTILECVKD SDASIRKRAL ELVFLLVNDT NAKPLTKELI DYLEVSDQDF
401: KGDLTAKICS IIEKFSQEKK WYIDQMLKVL SLAGSYVKDD VWHALIVAIS NAPDLQGYSV RSLYKAFRTS FEQVSLVRVV VWCIGEYGEM LVGNVGVLEV
501: EEPLTVTESD TVDVLEACLT GHSADITTRS MSLIALLKLS SRFPPTSERI KEIITEHKGS IVLELQQRAI EFNSIIQRHD NIKSSLVERM PVLDESAYMV
601: KKANSSQENI VAVKSSQMSL AGTSVTLPNG VAKPPAAPLV DLLDLSSDDA LVPTSTSKDF LHDLLGIDLT NSSSSGIAPS GGTDILMDLL SIGTPVQSDI
701: SPETVSSNQG FAPTTKPTPT TVQVLDLLDV LPSNGSVAGD QSPLYPSITA FQSSTLKIMF SFKKHPEKPQ VTEIHATFMN LSSDSYTDFV FQAAVPKFIQ
801: LHLDPASSNH LPANGNGTIT QTVTVTNSQH GQKPLAMRIR MVYKVDNQEK LEQGQINNFP PGL

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.