Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G053020.1 | Barley | cytosol | 95.29 | 95.29 |
| HORVU1Hr1G048590.1 | Barley | cytosol, mitochondrion | 92.94 | 92.94 |
| HORVU7Hr1G050510.16 | Barley | cytosol | 100.0 | 51.83 |
| HORVU3Hr1G040310.1 | Barley | cytosol | 87.06 | 41.34 |
| CDY24514 | Canola | cytosol | 67.06 | 28.22 |
| Bra031528.1-P | Field mustard | mitochondrion | 68.24 | 26.61 |
| Os02t0805000-01 | Rice | cytosol, plasma membrane | 90.59 | 15.75 |
| CDY33619 | Canola | mitochondrion | 64.71 | 12.09 |
| HORVU6Hr1G087920.7 | Barley | mitochondrion | 96.47 | 8.18 |
| HORVU7Hr1G027050.3 | Barley | cytosol | 83.53 | 8.17 |
| Zm00001d051998_P003 | Maize | cytosol | 83.53 | 7.88 |
| KXG31353 | Sorghum | cytosol | 83.53 | 7.88 |
| GSMUA_Achr3P10470_001 | Banana | cytosol, mitochondrion | 80.0 | 7.88 |
| GSMUA_Achr9P18340_001 | Banana | mitochondrion | 77.65 | 7.65 |
| VIT_01s0026g00310.t01 | Wine grape | mitochondrion | 77.65 | 7.52 |
| CDY59088 | Canola | mitochondrion | 76.47 | 7.45 |
| CDY47649 | Canola | mitochondrion | 76.47 | 7.45 |
| Bra024627.1-P | Field mustard | mitochondrion | 76.47 | 7.45 |
| Bra012393.1-P | Field mustard | mitochondrion | 76.47 | 7.44 |
| CDY28466 | Canola | mitochondrion | 76.47 | 7.44 |
| CDY25807 | Canola | mitochondrion | 76.47 | 7.43 |
| AT1G23900.2 | Thale cress | mitochondrion | 76.47 | 7.42 |
| KRH45711 | Soybean | cytosol, mitochondrion | 76.47 | 7.38 |
| KRH69527 | Soybean | mitochondrion | 74.12 | 7.22 |
| Solyc04g025870.2.1 | Tomato | plastid | 74.12 | 7.18 |
| KRH74623 | Soybean | mitochondrion | 71.76 | 7.0 |
| PGSC0003DMT400010532 | Potato | cytosol, mitochondrion | 70.59 | 6.83 |
| Solyc05g005780.2.1 | Tomato | nucleus | 70.59 | 6.83 |
| AT1G60070.2 | Thale cress | cytosol, mitochondrion | 71.76 | 6.79 |
| HORVU4Hr1G089310.1 | Barley | cytosol | 36.47 | 2.92 |
| HORVU1Hr1G054180.2 | Barley | cytosol, plastid | 25.88 | 2.32 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 21.18 | 1.87 |
| GSMUA_Achr10P... | Banana | cytosol | 1.18 | 0.27 |
| CDX91727 | Canola | mitochondrion | 0.0 | 0.0 |
| KRG99303 | Soybean | nucleus | 0.0 | 0.0 |
| GSMUA_Achr10P... | Banana | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | UniProt:A0A287WGB6 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 |
| GO:GO:0030117 | EnsemblPlantsGene:HORVU5Hr1G019420 | EnsemblPlants:HORVU5Hr1G019420.1 | InterPro:IPR011989 | PFAM:PF01602 | PANTHER:PTHR22780 |
| PANTHER:PTHR22780:SF27 | SUPFAM:SSF48371 | UniParc:UPI000B461DE2 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:85451569..85455437
Molecular Weight (calculated)
9763.9 Da
IEP (calculated)
8.212
GRAVY (calculated)
-0.119
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MRAITVDTQA VQRHRVSILE CVKDADASIR KRALELVYLL VNDTNVKLLT KELVDYLQVA DPDFKEDLTA KICSIAKKFS QEKLW
001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
Arabidopsis Description
GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.