Factsheet for HORVU1Hr1G054180.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G215000.1	Wheat	cytosol, plastid	92.83	95.34
TraesCS1A01G211900.1	Wheat	plastid	92.51	95.12
TraesCS1B01G225600.1	Wheat	plastid	92.51	95.02
Os01t0512200-01	Rice	plasma membrane	78.06	78.31
EES17171	Sorghum	plastid	73.1	73.1
Zm00001d023820_P001	Maize	mitochondrion	70.46	72.14
Zm00001d041626_P001	Maize	plastid	71.41	71.94
EES14423	Sorghum	cytosol	19.3	66.79
KXG20021	Sorghum	cytosol	48.0	65.0
EER88616	Sorghum	cytosol	34.7	64.51
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	39.77	52.8
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	43.57	51.82
Solyc03g119270.1.1	Tomato	nucleus	41.88	40.93
PGSC0003DMT400014395	Potato	cytosol	41.67	40.72
CDY04318	Canola	cytosol, nucleus, plastid	34.39	40.6
Bra022309.1-P	Field mustard	nucleus	36.29	40.19
CDX92225	Canola	cytosol, nucleus, plastid	36.29	40.19
CDY24454	Canola	cytosol	35.87	39.81
KRH41691	Soybean	cytosol	38.4	39.74
VIT_17s0000g03430.t01	Wine grape	cytosol	39.98	39.52
CDY68338	Canola	nucleus	34.92	38.94
KRH60392	Soybean	cytosol	40.08	38.89
Bra032266.1-P	Field mustard	nucleus	34.7	38.71
AT1G48760.2	Thale cress	cytosol	34.92	38.09
HORVU5Hr1G019420.1	Barley	cytosol	2.32	25.88
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	2.11	23.53
HORVU3Hr1G053020.1	Barley	cytosol	2.11	23.53
HORVU7Hr1G050510.16	Barley	cytosol	3.69	21.34
HORVU3Hr1G040310.1	Barley	cytosol	3.38	17.88
HORVU7Hr1G027050.3	Barley	cytosol	14.98	16.34
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	15.61	15.37
HORVU6Hr1G087920.7	Barley	mitochondrion	14.87	14.06
HORVU4Hr1G089310.1	Barley	cytosol	14.13	12.62

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006903	GO:GO:0007032
GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	GO:GO:0080171	GO:GO:1990019	EnsemblPlantsGene:HORVU1Hr1G054180	EnsemblPlants:HORVU1Hr1G054180.2
InterPro:IPR011989	UniProt:M0YPF3	PFAM:PF01602	PANTHER:PTHR22781	SUPFAM:SSF48371	UniParc:UPI000295067D
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:400083932..400088301

Molecular Weight (calculated)

102116.0 Da

IEP (calculated)

6.654

GRAVY (calculated)

-0.075

Length

948 amino acids

Sequence
(BLAST)

001: MASAPSAPST APSLVDTLFQ RSLDDLVKSL RADPSAAGES LAVGRALSEI HREIRAPDAA TKAVALQKFT YLSSLHFVPV ASHPLAFPAI ELLASPHLPH
101: KRLAYLAASL SLHPASLSLL PLATHQIHKD LSPSTSAAAS HHVCALALQL LASPAAAAAP DLAVHLAHDL VPHLSRGSPR AIAAAARIIA ASPSTGVPVL
201: FKPLAACLAS SDQRASTAAA SAFCELSAPP ADVAPFLPLA PDLYNLLTTS RSNWALIKVL KIFARLAPLE SRLAARIVDP VCQLLTRSSA MSLTFECVRT
301: ALTALPAHNA AVSLAIGKVK EFLAASDDPN LRYLGLLALG MLGPAYASTV NESRDVITLS LGDADSNIRR EALHLMMGMV DDNNVMDIAG MLVSHAARSD
401: PEFANDILGA VLTACGRNVY ELVSDFDWYV SLLADMARSL HCAQGDEIGR QLVDVGLRVH DARPELVRSA RSLLIDPALL GNNLLCPVLS AAAWVSGEYI
501: ECSKDPVELV EALSQPRTSL LPMPVRAVYI QAVLKVIIFC CNLYVESSND SNKGSDLVFD ELAVDQTVSR GSKSEIQPAE EQIVMPGTAK NDPFSNKSIV
601: YIINLIETTV GPLVESKEVE VLERARNLMG FVHLLREIWE LKERKVSDHN KHNRVMELIK TMQTVFSREL SPVSVNAQKK ISLPEDLVLQ ENLSELADIL
701: SEDDTILSTS ISFLSRSSHS VETRDEPAVV SVDSSSLFEH RKRHGIYYLP TGKAEDDTNN YPCANDPLLS GENGSAMEDK SGTVQPASAG KKLKAMRSRP
801: KVVKLDGEDF LSSMMTSANV LKENPLSGAV RGMLMGRDAK PLCSPKAADK SLEDMGNKMD MGESSSQSVQ NIYADTGSLS TSSSRTSKQH DLTKEKSTIP
901: PDNDRKEARK HRTSSRSGHR QGKHKHRERP STQPDVAPQA PVVQDFLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.