Factsheet for Bra032266.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68338	Canola	nucleus	99.41	99.41
AT1G48760.2	Thale cress	cytosol	84.0	82.16
Bra022309.1-P	Field mustard	nucleus	72.82	72.31
VIT_17s0000g03430.t01	Wine grape	cytosol	58.94	52.24
KRH41691	Soybean	cytosol	55.88	51.86
KRH60392	Soybean	cytosol	58.94	51.28
Solyc03g119270.1.1	Tomato	nucleus	55.53	48.66
PGSC0003DMT400014395	Potato	cytosol	55.53	48.66
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	35.29	42.02
EES14423	Sorghum	cytosol	13.18	40.88
EER88616	Sorghum	cytosol	24.35	40.59
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	37.76	40.28
Os01t0512200-01	Rice	plasma membrane	39.65	35.66
TraesCS1A01G211900.1	Wheat	plastid	38.59	35.57
Zm00001d041626_P001	Maize	plastid	39.29	35.49
EES17171	Sorghum	plastid	39.41	35.34
TraesCS1D01G215000.1	Wheat	cytosol, plastid	38.35	35.32
Zm00001d023820_P001	Maize	mitochondrion	38.47	35.31
KXG20021	Sorghum	cytosol	29.06	35.29
TraesCS1B01G225600.1	Wheat	plastid	38.24	35.21
HORVU1Hr1G054180.2	Barley	cytosol, plastid	38.71	34.7
Bra024739.1-P	Field mustard	cytosol	5.29	17.11
Bra012393.1-P	Field mustard	mitochondrion	17.06	16.59
Bra024627.1-P	Field mustard	mitochondrion	16.71	16.28
Bra023199.1-P	Field mustard	cytosol	15.65	14.18
Bra037603.1-P	Field mustard	cytosol	16.82	14.1
Bra002427.1-P	Field mustard	cytosol	16.35	13.8
Bra031528.1-P	Field mustard	mitochondrion	3.41	13.3

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra032266
EnsemblPlants:Bra032266.1	EnsemblPlants:Bra032266.1-P	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0006903	GO:GO:0007032	GO:GO:0008150	GO:GO:0009987	GO:GO:0015031	GO:GO:0016020
GO:GO:0016043	GO:GO:0016192	GO:GO:0030117	GO:GO:0030123	GO:GO:0080171	GO:GO:1990019
InterPro:IPR011989	UniProt:M4ETY4	PFAM:PF01602	PIRSF:PIRSF037092	PANTHER:PTHR22781	SUPFAM:SSF48371
UniParc:UPI0002547CA1	SEG:seg	:	:	:	:

Description

AT1G48760 (E=1e-271) delta-ADR | delta-ADR (delta-adaptin); binding / clathrin binding / protein binding / protein transporter

Coordinates

chrA05:+:12170755..12173307

Molecular Weight (calculated)

95209.4 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.225

Length

850 amino acids

Sequence
(BLAST)

001: MDNLFQRSLE DLIKGFRLQL LGDSSFISRA LEELRREIKA TDLSTKSTAL HKLSYLAAIH GVDMSWAAFH ALEVVSSSRF HHKRIGYQAI TQSFHDQTPV
101: LLLITNQLRK DLNSVNEYEV SLALECLSRI GTRDLARDLS PEVFTLLGSS KSFVRKKATG VVLRVFDKYP DAVKVCFKRL VENLETSDPQ ILSAVVGVFC
201: ELASKDPTSC LPLAPEFFKI LVDSRNNWVL IKVIKIFSKL ASVEPRLGRK VAEPICEHMK RTVAKSLVFE CVRTVVSSLS DHEAAVKLAV AKIREFLVED
301: DPNLKYLGLH ALSIAAPKHL WAVLENKEAV VKALSDDDPN VKLEALHLLM AMVTEDNVSE ISRILMNYAL KSDPLFCNEI IISVLSVCSR NAYEIIVDFD
401: WYVSLLGEMA RIPHCQRGEE IEHQLIDIGM RVRDARPQLV RVSWALLIDP ALLGNMFLHP ILSAASWVSG EYVEFAKNPY ELVEALVQPR TDLLPPYIRA
501: IYIHSVFKVL VFCLGSYFSA QESSSGSSST VYESILNLVN VIEIGVWPLS GAYDVEVQER AKNVLGFIGM AKQDIAKKVN LQDNEAEACR VTAFMEDAFS
601: EELGPISANA REKVCVPDGL ELEENLGDLE EICGKFLKPV ESDSVSCTDK ISFSVSKLRI RDQQEASSST SLPPKESSSL LAEHRKRHGM YYLTSKKNDP
701: DSNGTPNDYP PANDLASEIL LDPLDPKRKA KHRKSRPVVV KLDEGGESRI TTSQAKTKQE SVTDDESLSR DIQSALLVNK KGKEREKCEG NSNLVVVQEE
801: ETSRIEKPQN SEKKKKKKKN GERTSRKHRS RRRSEVASSS EQVEIPDLLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.