Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014395 | Potato | cytosol | 97.01 | 97.01 |
| VIT_17s0000g03430.t01 | Wine grape | cytosol | 62.78 | 63.5 |
| KRH60392 | Soybean | cytosol | 57.73 | 57.32 |
| CDY04318 | Canola | cytosol, nucleus, plastid | 47.01 | 56.79 |
| KRH41691 | Soybean | cytosol | 53.3 | 56.44 |
| AT1G48760.2 | Thale cress | cytosol | 50.31 | 56.16 |
| Bra032266.1-P | Field mustard | nucleus | 48.66 | 55.53 |
| CDY68338 | Canola | nucleus | 48.66 | 55.53 |
| CDX92225 | Canola | cytosol, nucleus, plastid | 48.76 | 55.26 |
| Bra022309.1-P | Field mustard | nucleus | 48.56 | 55.02 |
| CDY24454 | Canola | cytosol | 48.35 | 54.92 |
| GSMUA_Achr4P06740_001 | Banana | cytosol, plastid | 37.84 | 51.4 |
| GSMUA_Achr4P13750_001 | Banana | nucleus, plastid | 40.93 | 49.81 |
| EES14423 | Sorghum | cytosol | 12.68 | 44.89 |
| EER88616 | Sorghum | cytosol | 23.09 | 43.92 |
| TraesCS1A01G211900.1 | Wheat | plastid | 40.1 | 42.19 |
| TraesCS1D01G215000.1 | Wheat | cytosol, plastid | 40.1 | 42.15 |
| TraesCS1B01G225600.1 | Wheat | plastid | 40.0 | 42.04 |
| HORVU1Hr1G054180.2 | Barley | cytosol, plastid | 40.93 | 41.88 |
| Os01t0512200-01 | Rice | plasma membrane | 40.72 | 41.8 |
| EES17171 | Sorghum | plastid | 40.31 | 41.24 |
| Zm00001d023820_P001 | Maize | mitochondrion | 39.18 | 41.04 |
| Zm00001d041626_P001 | Maize | plastid | 39.69 | 40.91 |
| KXG20021 | Sorghum | cytosol | 27.73 | 38.43 |
| Solyc11g066760.1.1 | Tomato | cytosol | 9.9 | 20.56 |
| Solyc04g025870.2.1 | Tomato | plastid | 16.08 | 17.79 |
| Solyc05g005780.2.1 | Tomato | nucleus | 15.67 | 17.29 |
| Solyc06g074650.2.1 | Tomato | plastid | 16.29 | 15.54 |
| Solyc08g075310.2.1 | Tomato | cytosol | 14.64 | 14.67 |
| Solyc11g066770.1.1 | Tomato | cytosol | 3.2 | 7.14 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.1 | InterPro:AP3_complex_dsu | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006903 | GO:GO:0007032 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0030117 |
| GO:GO:0030123 | GO:GO:0080171 | GO:GO:1990019 | InterPro:IPR011989 | UniProt:K4BM76 | PFAM:PF01602 |
| PIRSF:PIRSF037092 | PANTHER:PTHR22781 | SUPFAM:SSF48371 | EnsemblPlantsGene:Solyc03g119270.1 | EnsemblPlants:Solyc03g119270.1.1 | UniParc:UPI00027663E1 |
| SEG:seg | : | : | : | : | : |
Description
AP-3 complex subunit delta [Source:Projected from Arabidopsis thaliana (AT1G48760) UniProtKB/Swiss-Prot;Acc:Q9C744]
Coordinates
chr3:-:67906877..67909789
Molecular Weight (calculated)
108273.0 Da
IEP (calculated)
5.888
GRAVY (calculated)
-0.303
Length
970 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGPSLLDSL FQRSLEDLIK GLRLFVGDES SFISKAVDEI RREIKSTDQQ TKATALQKFT YLHSIHGVDM SWAAFHAIEL SSSQSFNFKR IAYLAASLSF
101: DPSTTDVILL LTHQLRKDLQ SPNSHEVSLA LHALYFISTP DLARDLTPEV FTLLNSNKGS TRKKAIAIIL RLFELYPDAV RVCFKRLVEN LENSDPAIVS
201: AVVGVFCELA CKEPKSYLPL APEFYKILAD SRNNWLLIKV LKIFVKLAPL EPRLGKKLVE PICDHLKKTG AKSLAFECVR TIVSSFSEYD SAVRLAVEKI
301: KEFLNEDDPN LKYLGLQALT IVAPKHLWAV LENKDFVIKS LSDADANIKL EALQLVLSMV SEDNVVDICK VLINYALKSD PEFCNEILGC ILLTCSRNVY
401: EIIVDFDWYV SLLGEMSRIP HCQKGEEIEN QLVDIGMRVK DARPELVRVG RDLLIDPALL GNPFVHRILS AAAWVSGEYV RFSKNPSEIV EALLQPRTSL
501: LPSSIKAVYI QSAFKVLTFY LYYSISTKGV ISSASQGVAD LMHGRVLENS QFVRTGPVAD SDTDDGGLNP RMLHQSVRDA SVESFEDMST AHEWLSSTLP
601: KAEPITEESI LNILDLVEIT LGPLAGSHEV EILERSRNVL GLVDLIREEL PGYLVKREED DDKGQKKTHE MIKLIAEAFS EELGPVSASS QERVPMPEGI
701: VLNQSLDDLD AICGDLGLHI PTSFSLGKSI SSEKDDVTMS DRQSKEEYES TESTSLLAEH RKRHGLYYLQ SQKKEMAYDD YPPANDLKTG ENADDEADDL
801: IKLTEQSLFS KKKANQAKPR PVVVKLDDGD GPFIPAKKVE SKDDLISGAV RDVLLGDEAT TSSSRAKKSD KSSSKRRQKD KLDVDKSSGP IEDSKMMENS
901: ELENVNLRRS KRHSRGKEKK HRSTAKDRNE HEEGDKQKVS HHHGKHKSRQ RADGALTLAA QSPVIPDFLL
101: DPSTTDVILL LTHQLRKDLQ SPNSHEVSLA LHALYFISTP DLARDLTPEV FTLLNSNKGS TRKKAIAIIL RLFELYPDAV RVCFKRLVEN LENSDPAIVS
201: AVVGVFCELA CKEPKSYLPL APEFYKILAD SRNNWLLIKV LKIFVKLAPL EPRLGKKLVE PICDHLKKTG AKSLAFECVR TIVSSFSEYD SAVRLAVEKI
301: KEFLNEDDPN LKYLGLQALT IVAPKHLWAV LENKDFVIKS LSDADANIKL EALQLVLSMV SEDNVVDICK VLINYALKSD PEFCNEILGC ILLTCSRNVY
401: EIIVDFDWYV SLLGEMSRIP HCQKGEEIEN QLVDIGMRVK DARPELVRVG RDLLIDPALL GNPFVHRILS AAAWVSGEYV RFSKNPSEIV EALLQPRTSL
501: LPSSIKAVYI QSAFKVLTFY LYYSISTKGV ISSASQGVAD LMHGRVLENS QFVRTGPVAD SDTDDGGLNP RMLHQSVRDA SVESFEDMST AHEWLSSTLP
601: KAEPITEESI LNILDLVEIT LGPLAGSHEV EILERSRNVL GLVDLIREEL PGYLVKREED DDKGQKKTHE MIKLIAEAFS EELGPVSASS QERVPMPEGI
701: VLNQSLDDLD AICGDLGLHI PTSFSLGKSI SSEKDDVTMS DRQSKEEYES TESTSLLAEH RKRHGLYYLQ SQKKEMAYDD YPPANDLKTG ENADDEADDL
801: IKLTEQSLFS KKKANQAKPR PVVVKLDDGD GPFIPAKKVE SKDDLISGAV RDVLLGDEAT TSSSRAKKSD KSSSKRRQKD KLDVDKSSGP IEDSKMMENS
901: ELENVNLRRS KRHSRGKEKK HRSTAKDRNE HEEGDKQKVS HHHGKHKSRQ RADGALTLAA QSPVIPDFLL
001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL
Arabidopsis Description
DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.