Factsheet for TraesCS1B01G225600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G215000.1	Wheat	cytosol, plastid	98.81	98.81
TraesCS1A01G211900.1	Wheat	plastid	97.29	97.4
HORVU1Hr1G054180.2	Barley	cytosol, plastid	95.02	92.51
Os01t0512200-01	Rice	plasma membrane	78.33	76.51
EES17171	Sorghum	plastid	73.67	71.73
Zm00001d023820_P001	Maize	mitochondrion	71.29	71.06
Zm00001d041626_P001	Maize	plastid	72.37	70.99
EES14423	Sorghum	cytosol	20.26	68.25
KXG20021	Sorghum	cytosol	49.95	65.86
EER88616	Sorghum	cytosol	36.29	65.69
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	39.33	50.84
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	43.77	50.69
Solyc03g119270.1.1	Tomato	nucleus	42.04	40.0
CDY04318	Canola	cytosol, nucleus, plastid	34.78	39.98
Bra022309.1-P	Field mustard	nucleus	36.94	39.84
CDX92225	Canola	cytosol, nucleus, plastid	36.84	39.72
PGSC0003DMT400014395	Potato	cytosol	41.71	39.69
CDY24454	Canola	cytosol	36.62	39.58
KRH41691	Soybean	cytosol	38.68	38.97
CDY68338	Canola	nucleus	35.43	38.47
VIT_17s0000g03430.t01	Wine grape	cytosol	39.87	38.37
KRH60392	Soybean	cytosol	40.52	38.28
Bra032266.1-P	Field mustard	nucleus	35.21	38.24
AT1G48760.2	Thale cress	cytosol	35.64	37.86
TraesCS3B01G457300.1	Wheat	cytosol, nucleus, plastid	16.36	15.84
TraesCS7B01G029800.2	Wheat	cytosol	14.84	15.75
TraesCS6B01G410900.2	Wheat	cytosol	14.95	15.4
TraesCS4B01G395700.3	Wheat	cytosol, unclear	14.95	13.26

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0006903	GO:GO:0007032	GO:GO:0008150
GO:GO:0009987	GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0016192	GO:GO:0030117
GO:GO:0030123	GO:GO:0080171	GO:GO:1990019	InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22781
SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS1B01G225600	EnsemblPlants:TraesCS1B01G225600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:405181478..405184249

Molecular Weight (calculated)

99690.2 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.066

Length

923 amino acids

Sequence
(BLAST)

001: MASAPSAPST APSLVDTLFQ RSLDDLVKSL RADPSAAGES LAVGRALSEI HREIRAPDAA TKAVALQKFT YLSSLHFVPV VSHPHAFPAI ELLASPHLPH
101: KRLAYLAASL SLHPASLSLL PLATHQIHKD LSPSTSAAAS HHVCALALQL LASPAAAAAP DLAVHLAHDL VPHLSRGSPR AIAAAARIIA ASPSTGVPVL
201: FKPLAACLAS SDPRASTAAA SAFCELSAPP ADVAPFLPLA PDLYNLLTTS RSNWALIKVL KIFARLAPLE SRLAARIVDP VCQLLTRSSA MSLTFECVRT
301: VLTALPAHGA AVSLAIGKVK EFLAASDDPN LRYLGLLALG MLGPAYASTV NESRDVIALS LGDADSNIRR EALHLMMGMV DENNVMDIAG MLVSHAARSD
401: PEFANDILGA VLAACGRNVY ELVSDFDWYI SLLADMARSL HCAQGDEIGR QLVDVGLRVH DARPELVRSA RSLLIDPALL GNNLLCSVLS AAAWVSGEYI
501: DCSKDPVELV EALSQPRTSL LPMSVRAVYI QAVLKVVTFC CNLYVESSND SNKESDLVFD ELAVDQTVSR GSKSETQPAE EQIIMPGTAK NDPFSNKSIV
601: YMINLIETTV GPLVESKEVE VLERARNLIG FVHLLREIWE LKERKVSDHN KHNRVVELIN SMQKVFSQEL RPVSVNAQKK ISLPEDLVLH ENLSELADIL
701: SEDDTILSTS ISFISRNCHS VETRDEPAVV SVDSSSLFEH RKRHGIYYLP TGKAEDDANS YPRANDPLLS AENASAMEDK SETVQPVSAG KKLKAMRSRP
801: KVVKLDGEDF LSSMMTSANI LKAADKSEVM GKKMDTGESS SQWIQNIYAD TGSLSTSSSR TSKQHDLTKE KSTIPPDSDK KEPRKHRTSS RSGHRQGKHT
901: HRERPSTQPD VAPQAPVVQD FLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.