Factsheet for Zm00001d041626_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17171	Sorghum	plastid	91.29	90.61
Zm00001d023820_P001	Maize	mitochondrion	87.78	89.2
EES14423	Sorghum	cytosol	25.29	86.86
EER88616	Sorghum	cytosol	45.91	84.71
KXG20021	Sorghum	cytosol	60.57	81.43
Os01t0512200-01	Rice	plasma membrane	74.18	73.86
TraesCS1D01G215000.1	Wheat	cytosol, plastid	70.99	72.37
TraesCS1B01G225600.1	Wheat	plastid	70.99	72.37
TraesCS1A01G211900.1	Wheat	plastid	70.67	72.13
HORVU1Hr1G054180.2	Barley	cytosol, plastid	71.94	71.41
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	39.53	52.1
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	44.0	51.94
CDY04318	Canola	cytosol, nucleus, plastid	35.07	41.1
Bra022309.1-P	Field mustard	nucleus	36.56	40.19
CDX92225	Canola	cytosol, nucleus, plastid	36.56	40.19
KRH41691	Soybean	cytosol	38.79	39.85
PGSC0003DMT400014395	Potato	cytosol	41.02	39.79
CDY24454	Canola	cytosol	36.03	39.7
Solyc03g119270.1.1	Tomato	nucleus	40.91	39.69
CDY68338	Canola	nucleus	35.71	39.53
Bra032266.1-P	Field mustard	nucleus	35.49	39.29
AT1G48760.2	Thale cress	cytosol	35.71	38.67
VIT_17s0000g03430.t01	Wine grape	cytosol	39.21	38.48
KRH60392	Soybean	cytosol	39.85	38.38
Zm00001d025314_P001	Maize	cytosol	3.61	21.12
Zm00001d045195_P002	Maize	cytosol	14.77	16.03
Zm00001d036305_P003	Maize	mitochondrion	14.77	15.34
Zm00001d051998_P003	Maize	cytosol	14.67	15.32
Zm00001d042370_P003	Maize	cytosol	15.52	15.04
Zm00001d012061_P005	Maize	cytosol	15.2	14.67
Zm00001d027333_P018	Maize	cytosol	14.03	12.36
Zm00001d048511_P008	Maize	cytosol	13.71	12.11

Protein Annotations

EntrezGene:100279859	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-type_fold	EMBL:BT086119	UniProt:C4J5M2
InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030123	ProteinID:ONM33403.1	PFAM:PF01602	PANTHER:PTHR22781
SUPFAM:SSF48371	UniParc:UPI0001A4C12F	EnsemblPlantsGene:Zm00001d041626	EnsemblPlants:Zm00001d041626_P001	EnsemblPlants:Zm00001d041626_T001	SEG:seg

Description

AP-3 complex subunit delta

Coordinates

chr3:-:129953081..129955906

Molecular Weight (calculated)

101366.0 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.021

Length

941 amino acids

Sequence
(BLAST)

001: MASTPPAPAV APSLVDTLFQ RSLNDLVKSL RADPSAAGEA PAVTRALSEI HREIRAPDAA TKSVAVQKLT YLSSLHFAPV SSHPLAFPAI ELLASPHLPH
101: KRLAYLAASL SLHPASLSLL PLATHQLHKD LSPSAGAHQH VSALALQLLG SPAAAAAPDL PVHLVHDLVP HLTRGSPRAI AAAARVIAAS PSAAVPVLFK
201: PLAACLASPD PRASTAAVAA FCDLSAPPAD ATPFLPLAPD LYSLLTTSRS NWALIKVLKV FARLAPLESR LAAKIVDPVC QLLTRSAAMS LTFECIRTVL
301: TALPAHDAAV RLAIGKTKEF IAAADDPNLR YLGLLALGMI GPAYASTVND CWDAIVKSLG DADANIRQEA LHLIMGMVNE NNIMDIAGIL ISHVPKSDPE
401: FASDILGAVL AACGHNVYEM VVDFDWYVSL LVDMARTLHC AQGDEIGRQF VDLGLRVQDA RPELVRLARS LLIDPALLGN HFLFPVLSAA AWISGEYVDL
501: TKDPVELVEA LLQPRTSLLP ISVRAVYIHA VFKLITWCFS VYVGRLGDSG MAMDVMFDRL AADQTVSAES NAALGSGEEQ DIGASTVLKD PFLHESILYM
601: INLIQTTIGP LINCNEVELQ ERAHNLIGFI HLVREIQELN KRKVADGDKS SRLKELVEIM RTVFCQELGP VSVNAQMKVA PPDGLILNEN LVELAGMVSE
701: DDTTPSASIF FYPCSRHSLD TRDEPAVSIG SSSLSEHRKR HELFYLQTRK TEDEPNDYPQ ANDSLPSSSN NSVNDDKLKA ADLVFPGKKL TAMKSRPKVV
801: KLDAEDFLSS MMPSANVPKE DPLSGVLRDV LFGSDAKALS SQRTSDINLE GMLNKTSSNE SSSQQIENLG SHPASCSRTS KEQNNDKVKG TNPPESDGKE
901: PRKHRSSGRS GHRQGKHKHR EKSSTQPDAI PQAPVIQDFL L

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.