Factsheet for Zm00001d045195_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19397	Sorghum	cytosol, plastid	95.85	95.08
Zm00001d036305_P003	Maize	mitochondrion	95.96	91.83
Os06t0167100-01	Rice	plasma membrane	89.85	89.54
TraesCS7B01G029800.2	Wheat	cytosol	87.31	87.01
HORVU7Hr1G027050.3	Barley	cytosol	86.97	86.77
TraesCS7D01G128900.2	Wheat	cytosol	86.74	86.44
TraesCS7A01G129800.3	Wheat	peroxisome	86.62	86.32
GSMUA_Achr10P...	Banana	mitochondrion	31.95	82.2
CDX91727	Canola	mitochondrion	10.84	78.33
Zm00001d051998_P003	Maize	cytosol	80.16	77.14
GSMUA_Achr9P18340_001	Banana	mitochondrion	75.43	75.78
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	74.86	75.2
VIT_01s0026g00310.t01	Wine grape	mitochondrion	71.63	70.73
KRH74623	Soybean	mitochondrion	69.67	69.35
KRH69527	Soybean	mitochondrion	69.78	69.3
CDY59088	Canola	mitochondrion	68.05	67.66
Bra024627.1-P	Field mustard	mitochondrion	68.05	67.66
CDY28466	Canola	mitochondrion	68.17	67.62
CDY25807	Canola	mitochondrion	68.17	67.54
CDY47649	Canola	mitochondrion	67.82	67.43
Solyc04g025870.2.1	Tomato	plastid	68.17	67.39
Bra012393.1-P	Field mustard	mitochondrion	67.82	67.28
AT1G23900.2	Thale cress	mitochondrion	67.47	66.78
Solyc05g005780.2.1	Tomato	nucleus	67.01	66.1
KRH45711	Soybean	cytosol, mitochondrion	67.13	66.06
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	66.9	65.98
AT1G60070.2	Thale cress	cytosol, mitochondrion	67.24	64.92
CDY24514	Canola	cytosol	14.88	63.86
CDY33619	Canola	mitochondrion	31.72	60.44
GSMUA_Achr10P...	Banana	cytosol	23.64	55.86
Bra031528.1-P	Field mustard	mitochondrion	12.8	50.92
KRG99303	Soybean	nucleus	7.96	38.33
Zm00001d025314_P001	Maize	cytosol	4.27	22.98
Zm00001d027333_P018	Maize	cytosol	24.68	20.04
Zm00001d048511_P008	Maize	cytosol	24.34	19.81
Zm00001d012061_P005	Maize	cytosol	19.38	17.23
Zm00001d042370_P003	Maize	cytosol	18.34	16.37
Zm00001d023820_P001	Maize	mitochondrion	15.8	14.79
Zm00001d041626_P001	Maize	plastid	16.03	14.77

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100193027	Gene3D:2.60.40.1230	MapMan:22.1.2.1	InterPro:AP1_complex_gsu	ProteinID:AQL01791.1
ProteinID:AQL01796.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf
InterPro:GAE_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030121
GO:GO:0030131	GO:GO:0031410	InterPro:IPR008153	InterPro:IPR011989	UniProt:K7VAA4	PFAM:PF01602
PFAM:PF02883	PIRSF:PIRSF037094	PFscan:PS50180	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809
SUPFAM:SSF48371	SUPFAM:SSF49348	UniParc:UPI000220CA3A	EnsemblPlantsGene:Zm00001d045195	EnsemblPlants:Zm00001d045195_P002	EnsemblPlants:Zm00001d045195_T002
SEG:seg	:	:	:	:	:

Description

AP-1 complex subunit gamma-1

Coordinates

chr9:-:15778735..15788930

Molecular Weight (calculated)

94926.5 Da

IEP (calculated)

5.872

GRAVY (calculated)

-0.028

Length

867 amino acids

Sequence
(BLAST)

001: MDLAINPFSS GTRLRDMIRA IRACKTAAEE RAVVRRECAA IRAAISEGDQ DYRHRNMAKL MFIHMLGYPT HFGQMECLKL IAAAGFPEKR IGYLGLMLLL
101: DERQEVLMLV TNSLKQDLNH SNQFIVGLAL CALGNICSAE MARDLAPEVE RLLQNRDPNT KKKAALCSVR IVRKVPDLAE IFMSAATSLL KEKHHGVLIS
201: AVQLCMELCN ASNEALEYLR KNCLEGLVRI LRDVSNSSYA PEYDIGGITD PFLHIRVLKL MRILGQGDAD CSEYINDILA QVSTKTESNK NAGNAILYEC
301: VETIMSIEAT SGLRVLAINI LGRFLSNRDN NIRYVALNML MKAIAVDTQA VQRHRATILE CVKDADVSIR KRALELVYLL VNDTNVKPLT KELVDYLEVS
401: DQDFKEDLTA KICSIVEKFS LDRLWYLDQM FRVLSLAGNH VKDDVWHALI VLVSNASELQ GYSVRSLYKA LQASSEQESL VRVAVWCIGE YGEMLVNNLS
501: MLDMEEPITV TEYDAVDAVE AALQRYSADV TTRAMCLVSL LKLSSRFPPT SERIKEIVAQ NKGNTVLELQ QRSIEFSSII QRHQSMKSSL LERMPVLDEA
601: NYLVKRAASI QAAVPSVNSA PAVTSGGPFK LPNGVGKPAA PLADLLDLSS DDAPVTTSAP TTAPNDFLQD LLGIGLTDSS PIGGAPSTST DILMDLLSIG
701: SSSVQNGPPT ANFSLPGIET KSVAVTPQVV DLLDGLSSGT SLPDENATYP TITAFQSATL RITFSFKKQP GKPQETTISA SFTNLATTTF TDFVFQAAVP
801: KFIQLRLDPA SSSTLPASGN GSVTQSLSVT NNQHGQKPLA MRIRMSYKVN GEDRLEQGQI SNFPAGL

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.