CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74623	Soybean	mitochondrion	97.37	97.59
KRH45711	Soybean	cytosol, mitochondrion	84.19	83.43
CDX91727	Canola	mitochondrion	11.45	83.33
VIT_01s0026g00310.t01	Wine grape	mitochondrion	82.7	82.23
GSMUA_Achr10P...	Banana	mitochondrion	31.04	80.42
Solyc05g005780.2.1	Tomato	nucleus	79.73	79.18
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	79.73	79.18
Solyc04g025870.2.1	Tomato	plastid	78.12	77.77
CDY59088	Canola	mitochondrion	76.63	76.72
CDY47649	Canola	mitochondrion	76.52	76.61
Bra024627.1-P	Field mustard	mitochondrion	76.52	76.61
CDY25807	Canola	mitochondrion	76.52	76.34
CDY28466	Canola	mitochondrion	76.4	76.32
Bra012393.1-P	Field mustard	mitochondrion	76.4	76.32
Os02t0805000-01	Rice	cytosol, plasma membrane	42.5	75.87
AT1G23900.2	Thale cress	mitochondrion	76.06	75.8
AT1G60070.2	Thale cress	cytosol, mitochondrion	77.2	75.06
HORVU5Hr1G019420.1	Barley	cytosol	7.22	74.12
HORVU3Hr1G053020.1	Barley	cytosol	6.99	71.76
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	6.99	71.76
GSMUA_Achr9P18340_001	Banana	mitochondrion	70.45	71.26
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	69.99	70.8
CDY24514	Canola	cytosol	16.38	70.79
HORVU7Hr1G027050.3	Barley	cytosol	70.1	70.43
Os06t0167100-01	Rice	plasma membrane	70.1	70.34
Zm00001d045195_P002	Maize	cytosol	69.3	69.78
TraesCS7D01G128900.2	Wheat	cytosol	69.53	69.77
TraesCS7A01G129800.3	Wheat	peroxisome	69.42	69.66
TraesCS7B01G029800.2	Wheat	cytosol	69.19	69.43
KXG19397	Sorghum	cytosol, plastid	69.19	69.11
TraesCS6A01G373200.1	Wheat	mitochondrion	68.73	67.26
Zm00001d036305_P003	Maize	mitochondrion	69.42	66.89
CDY33619	Canola	mitochondrion	34.82	66.81
TraesCS6D01G357400.1	Wheat	golgi	68.61	66.78
TraesCS6B01G410900.2	Wheat	cytosol	68.38	66.63
KXG31353	Sorghum	cytosol	67.01	64.93
Zm00001d051998_P003	Maize	cytosol	66.78	64.71
HORVU3Hr1G040310.1	Barley	cytosol	12.49	60.89
HORVU7Hr1G050510.16	Barley	cytosol	11.34	60.37
HORVU6Hr1G087920.7	Barley	mitochondrion	69.07	60.12
Bra031528.1-P	Field mustard	mitochondrion	13.75	55.05
GSMUA_Achr10P...	Banana	cytosol	22.45	53.41
KRG99303	Soybean	nucleus	8.48	41.11
KRH26563	Soybean	endoplasmic reticulum	25.54	21.86
KRH22743	Soybean	cytosol, endoplasmic reticulum	25.43	21.76
KRH07246	Soybean	nucleus	21.76	19.37
KRH76456	Soybean	nucleus	21.42	19.36
KRH07767	Soybean	nucleus	21.42	19.06
KRH39774	Soybean	nucleus	21.76	18.48
KRH41691	Soybean	cytosol	16.84	16.05
KRH60392	Soybean	cytosol	17.07	15.25
KRH25154	Soybean	cytosol	6.07	13.02

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100815152	Gene3D:2.60.40.1230	MapMan:22.1.2.1	EMBL:ACUP02000720	InterPro:AP1_complex_gsu
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:GAE_dom
EnsemblPlantsGene:GLYMA_02G033300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0008565	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030121
GO:GO:0030131	GO:GO:0031410	InterPro:IPR008153	InterPro:IPR011989	UniProt:K7K676	EnsemblPlants:KRH69527
ProteinID:KRH69527	ProteinID:KRH69527.1	PFAM:PF01602	PFAM:PF02883	PIRSF:PIRSF037094	PFscan:PS50180
PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809	SUPFAM:SSF48371	SUPFAM:SSF49348	UniParc:UPI000295DFCA
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:3070571..3082375

Molecular Weight (calculated)

95553.1 Da

IEP (calculated)

6.465

GRAVY (calculated)

-0.056

Length

873 amino acids

Sequence
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECAAIRAA INENDNDYRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP EFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCSIRIIKK VPDLAENFIN PATSLLREKH HGVLITGVQL
201: CTDLCKISTE ALEHIRKKCT DGLVRTLKDL ANSPYSPEYD IAGITDPFLH IRLLKLLRVL GEGNADASDT MNDILAQVAT KTESNKVAGN AILYECVQTI
301: MSIEDNGGLR VLAINILGRF LSNRDNNIRY VALNMLMKAV TADAQAVQRH RATIIECVKD SDASIRKRAL ELVYVLVNET NVKPLAKELI DYLEVSDLDF
401: REDLTAKICS IVAKYSPEKI WYIDQMLKVL SEAGNFVKDE VWYALVVVIS NASELHGYTV RALYRAFQTS AEQETLVRVT VWCIGEYGDM LVNNVGMLDI
501: EDPITQVTES DAVDVIEIAI KRHASDLTTK AMALVALLKL SSRFPSCSER IKEIIVQFKG SFVLELQQRA IEFSSIISKH QNIRSTLVER MPVLDEATYI
601: GRRAGSLPGA ASTPTAPSFN LPNGVAKPVA PLVDLLDLSS DDAPAPSSSG GGDILQDLLG VDLSPASQQS VAGQASKSGN DVLLDLLSIG SPSAESSSST
701: VDILSSNSSN KAPVSSSLDG LSSLSLSTKT TSNAAPMMNL LDGFAPSPPT ENNGSVYPSV TAFESSSLRL TFNFSKQPGN PQTTVIQATF MNLSSNSYTD
801: FVFQAAVPKF LQLHLDPASS NTLPANGSIT QSLKITNSQH GKKSLVMRIR IAYKINGKDT LEEGQVNNFP HGL

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.