CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07767	Soybean	nucleus	96.13	96.13
CDY70074	Canola	cytosol	53.72	83.39
KRH76456	Soybean	nucleus	80.22	81.47
Bra024739.1-P	Field mustard	cytosol	21.51	80.23
Zm00001d025314_P001	Maize	cytosol	12.54	76.4
KRH39774	Soybean	nucleus	79.71	76.07
VIT_02s0087g00690.t01	Wine grape	nucleus	73.8	75.26
GSMUA_Achr8P08830_001	Banana	cytosol	62.18	74.03
AT1G31730.1	Thale cress	cytosol	69.01	72.17
Bra023199.1-P	Field mustard	cytosol	68.6	71.75
Solyc08g075310.2.1	Tomato	cytosol	69.72	70.66
CDY42099	Canola	cytosol	67.69	70.34
GSMUA_Achr11P...	Banana	cytosol	65.34	68.85
CDX84997	Canola	cytosol	60.65	68.39
TraesCS3B01G457300.1	Wheat	cytosol, nucleus, plastid	66.26	68.21
TraesCS3D01G417200.1	Wheat	cytosol	66.16	68.1
EES04102	Sorghum	cytosol	67.07	67.91
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	65.95	67.19
Os01t0916200-02	Rice	plasma membrane	57.59	67.1
Zm00001d012061_P005	Maize	cytosol	65.34	65.74
Zm00001d042370_P003	Maize	cytosol	63.91	64.57
TraesCS3A01G421500.1	Wheat	golgi	66.36	62.96
PGSC0003DMT400004931	Potato	nucleus	21.71	51.2
KRH69527	Soybean	mitochondrion	19.37	21.76
KRH74623	Soybean	mitochondrion	19.16	21.58
KRH45711	Soybean	cytosol, mitochondrion	18.65	20.77
KRH26563	Soybean	endoplasmic reticulum	17.13	16.47
KRH22743	Soybean	cytosol, endoplasmic reticulum	16.92	16.27
KRH41691	Soybean	cytosol	14.88	15.94
KRH60392	Soybean	cytosol	14.98	15.05
KRG99303	Soybean	nucleus	2.14	11.67
KRH25154	Soybean	cytosol	3.87	9.34

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100779276	MapMan:22.5.2.2.1	EMBL:ACUP02009947	InterPro:AP4_complex_esu	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	EnsemblPlantsGene:GLYMA_16G076500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030124
UniProt:I1MLZ0	InterPro:IPR011989	EnsemblPlants:KRH07246	ProteinID:KRH07246	ProteinID:KRH07246.1	PFAM:PF01602
PIRSF:PIRSF037097	PANTHER:PTHR22780	PANTHER:PTHR22780:SF13	SUPFAM:SSF48371	UniParc:UPI000233AEE1	SEG:seg

Description

hypothetical protein

Coordinates

chr16:+:7750675..7761113

Molecular Weight (calculated)

107463.0 Da

IEP (calculated)

5.741

GRAVY (calculated)

-0.263

Length

981 amino acids

Sequence
(BLAST)

001: MEQLKTIGRE LAMGSQGGFG QSKEFLELVK SIGESRSKAE EDRIVLREIE TLKRRIAEPD IPKRKMKEYI IRLLYVEMLG HDASFGHIHA VKMTHDDSLL
101: LKRTGYLAVT LLLNDDDDLI ILIVNTIQKD LKSDNYLVVC AALNAVCRLI SEETIPAVLP SVVDLLAHPK DAVRKKAVMA LHRFHHKSPS SVSHLISNFR
201: KKLCDNDPGV MGATLCPLFD LIAVDPSPYK DLVVSFVSIL KQVAEHRLPK SYDYHQMPVP FIQIKLLKIL ALLGSGDKQA SEQMYTVIGE IIRKGDSSSN
301: IGNAILYGCI CCVSSIYPNA KLLEAAADVN AKFLKSDSHN LKYMGIDALG RLIKISPHVA EQHQLAVIDC LEDPDDSLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIS DDHYKTYIAS RCVELAEQFA PSNYWFIQTM NKVFEHAGDL VNIKVAHNLM RLIGEGFEED DNAAYSQLRS SAVESYLRII GEPKLPSAFL
501: QVICWVLGEY GTADGKYSAS YITGKLCDVA EAYSNDETVK AYAVSALTKI YAFEIAAGRK VDLLSECLSF IEELLASHST DLQQRAYELQ ALIGLDAQAV
601: ETIMPQDASG EDIEVDKNLA FLNQYVQQSL ERGALPYIPE DERNGTVNVS NFRSQDQHES AQHGLRFEAY EVPKPPMPSK VAPVSLSSST DLVPVPEPLY
701: SMETHPMSSV GASETGSSGL KLKLDGVQKK WGRPTYSSPT SSSSTSTSQN SVNGVTQMDV ATAVNSKARD NYDTRKQRIE ISPEKQKLAD KLFGGSTKTD
801: KRSSTSNKVP KASTSAADRT QELKAAAVPS EVAREKTNQQ SPPPDLLDLG EPTVTVAPPS VDPFKQLEGL LDPNLSSTTN HSGAAVTNAP DIMALYAETP
901: ASRETESGGY SIPVTGDNVN ILSELSNAAA RGTTGETTAT PLSQSVKGPN VKDSLQKDAK VRQMGVTPSG QNPNLFSDLL G

Best Arabidopsis Sequence Match ( AT1G31730.1 )
(BLAST)

001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG

Arabidopsis Description

AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.