Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 98.43 | 98.43 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 97.9 | 96.88 |
| Zm00001d025314_P001 | Maize | cytosol | 15.74 | 93.17 |
| TraesCS3A01G421500.1 | Wheat | golgi | 98.64 | 90.91 |
| Os01t0916200-02 | Rice | plasma membrane | 77.44 | 87.65 |
| EES04102 | Sorghum | cytosol | 89.09 | 87.62 |
| Zm00001d012061_P005 | Maize | cytosol | 86.99 | 85.03 |
| Zm00001d042370_P003 | Maize | cytosol | 84.68 | 83.11 |
| CDY70074 | Canola | cytosol | 52.68 | 79.43 |
| Bra024739.1-P | Field mustard | cytosol | 21.83 | 79.09 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 67.26 | 77.79 |
| GSMUA_Achr11P... | Banana | cytosol | 70.51 | 72.18 |
| Bra023199.1-P | Field mustard | cytosol | 67.89 | 68.98 |
| AT1G31730.1 | Thale cress | cytosol | 67.68 | 68.76 |
| CDY42099 | Canola | cytosol | 67.05 | 67.69 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 68.31 | 67.67 |
| CDX84997 | Canola | cytosol | 60.76 | 66.55 |
| KRH07767 | Soybean | nucleus | 68.21 | 66.26 |
| KRH07246 | Soybean | nucleus | 68.1 | 66.16 |
| KRH76456 | Soybean | nucleus | 65.16 | 64.29 |
| Solyc08g075310.2.1 | Tomato | cytosol | 65.27 | 64.26 |
| KRH39774 | Soybean | nucleus | 64.32 | 59.63 |
| PGSC0003DMT400004931 | Potato | nucleus | 18.78 | 43.03 |
| TraesCS7D01G128900.2 | Wheat | cytosol | 17.94 | 19.66 |
| TraesCS6D01G357400.1 | Wheat | golgi | 17.1 | 18.17 |
| TraesCS1D01G215000.1 | Wheat | cytosol, plastid | 15.53 | 16.03 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | InterPro:AP4_complex_esu | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 | InterPro:IPR011989 | PFAM:PF01602 |
| PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS3D01G417200 | EnsemblPlants:TraesCS3D01G417200.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:528616062..528623053
Molecular Weight (calculated)
103705.0 Da
IEP (calculated)
6.031
GRAVY (calculated)
-0.318
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLRTIGRE LAMGSQGGWG QSKEFLDLVK SIGEARSKAE EDRIISRELE HLKRRLADPD VPRRKMKELL LRLVYAEMLG HDASFGHIHA VKMTHDESLP
101: LKRTGYLAVA LFIDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAASRLI GEEAIPAVLP QVVDLLAHPK EAVRKKAVMA LHRFYQRSPS SVSHLVSNFR
201: XRLCDNDPGV MGATLCPLYD LILEDPNAYK DLVVSFVNIL KQVAERRLPT SYDYHQMPAP FIQIKLLKIL AVLGSGDKSA SGHMYTVLGD IFRKGDTASN
301: IGNAILYECI CCVSCIFPNS KMLDAAAETT SKFLKSDSHN LKYMGIDALG RLIKINPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSTNVEVIVD
401: RMIEYMISIT DHHYKAEIAS RCVELAEQFA PSNQWFIQTM NKVFEHAGDL VNIRVAHNLM RLIAEGFGEE DEGADSQLRS SAVNSYLRIL GEPKLPSSFL
501: QIICWVLGEY GTADGKHPAS YIIGKLCDVA EAHPTDDTVR GYAVSAILKI FAFEIAVGRK SDMLPEFQSL VDELSSSHST DLQQRAYEVQ ALLGLDKQAV
601: ESVMPIDASC EDIEVDRNLS FLNSYVQQAL ENGATPYIPE SERSGVVSVG NYRAQDQHET SAHALRFEAY ELPKPSLPTA TSQSSVSLPT TDLVPVPEQS
701: HYREDHHQGR SHPSANAVSG EFGAKLRLDG VQKKWGRESY TSSSTPSSST SSQQAANGGS NSDGGLVTSQ ARESSYGSKS QQGTEVSAEK QRLAASLFGS
801: SAAKPNRKGH AGRKAAKESS STEKVTPQPA KEQVTPAAPP PDLLDLGEEP VSSSAPSADP FSQLDGLLGP ASASPAPSGT SAPSASNTPD LMSIFSDDIQ
901: TGATSASTEP TQKGATTKKG HSLQDALQKD ATARQVGVTP TGNNPNLFKD LLG
101: LKRTGYLAVA LFIDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAASRLI GEEAIPAVLP QVVDLLAHPK EAVRKKAVMA LHRFYQRSPS SVSHLVSNFR
201: XRLCDNDPGV MGATLCPLYD LILEDPNAYK DLVVSFVNIL KQVAERRLPT SYDYHQMPAP FIQIKLLKIL AVLGSGDKSA SGHMYTVLGD IFRKGDTASN
301: IGNAILYECI CCVSCIFPNS KMLDAAAETT SKFLKSDSHN LKYMGIDALG RLIKINPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSTNVEVIVD
401: RMIEYMISIT DHHYKAEIAS RCVELAEQFA PSNQWFIQTM NKVFEHAGDL VNIRVAHNLM RLIAEGFGEE DEGADSQLRS SAVNSYLRIL GEPKLPSSFL
501: QIICWVLGEY GTADGKHPAS YIIGKLCDVA EAHPTDDTVR GYAVSAILKI FAFEIAVGRK SDMLPEFQSL VDELSSSHST DLQQRAYEVQ ALLGLDKQAV
601: ESVMPIDASC EDIEVDRNLS FLNSYVQQAL ENGATPYIPE SERSGVVSVG NYRAQDQHET SAHALRFEAY ELPKPSLPTA TSQSSVSLPT TDLVPVPEQS
701: HYREDHHQGR SHPSANAVSG EFGAKLRLDG VQKKWGRESY TSSSTPSSST SSQQAANGGS NSDGGLVTSQ ARESSYGSKS QQGTEVSAEK QRLAASLFGS
801: SAAKPNRKGH AGRKAAKESS STEKVTPQPA KEQVTPAAPP PDLLDLGEEP VSSSAPSADP FSQLDGLLGP ASASPAPSGT SAPSASNTPD LMSIFSDDIQ
901: TGATSASTEP TQKGATTKKG HSLQDALQKD ATARQVGVTP TGNNPNLFKD LLG
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.