Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024739.1-P | Field mustard | cytosol | 29.43 | 97.34 |
| CDY70074 | Canola | cytosol | 68.62 | 94.46 |
| CDY42099 | Canola | cytosol | 87.47 | 80.61 |
| Zm00001d025314_P001 | Maize | cytosol | 14.37 | 77.64 |
| AT1G31730.1 | Thale cress | cytosol | 82.99 | 76.97 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 65.75 | 69.42 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 68.85 | 62.27 |
| KRH07767 | Soybean | nucleus | 69.31 | 61.47 |
| GSMUA_Achr11P... | Banana | cytosol | 65.4 | 61.12 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 66.78 | 60.97 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 66.55 | 60.76 |
| KRH07246 | Soybean | nucleus | 68.39 | 60.65 |
| Solyc08g075310.2.1 | Tomato | cytosol | 67.47 | 60.64 |
| KRH76456 | Soybean | nucleus | 67.01 | 60.35 |
| EES04102 | Sorghum | cytosol | 66.9 | 60.06 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 66.44 | 60.02 |
| Os01t0916200-02 | Rice | plasma membrane | 56.9 | 58.79 |
| Zm00001d012061_P005 | Maize | cytosol | 65.4 | 58.36 |
| Zm00001d042370_P003 | Maize | cytosol | 63.79 | 57.16 |
| KRH39774 | Soybean | nucleus | 66.44 | 56.23 |
| TraesCS3A01G421500.1 | Wheat | golgi | 66.78 | 56.19 |
| PGSC0003DMT400004931 | Potato | nucleus | 13.79 | 28.85 |
| CDX91727 | Canola | mitochondrion | 3.68 | 26.67 |
| CDY24514 | Canola | cytosol | 5.86 | 25.25 |
| CDY20343 | Canola | cytosol | 8.97 | 25.0 |
| CDY59088 | Canola | mitochondrion | 19.31 | 19.27 |
| CDY47649 | Canola | mitochondrion | 19.2 | 19.15 |
| CDY33619 | Canola | mitochondrion | 10.0 | 19.12 |
| CDY28466 | Canola | mitochondrion | 19.2 | 19.11 |
| CDY25807 | Canola | mitochondrion | 18.97 | 18.86 |
| CDY24454 | Canola | cytosol | 16.09 | 16.39 |
| CDX92225 | Canola | cytosol, nucleus, plastid | 15.98 | 16.24 |
| CDY04318 | Canola | cytosol, nucleus, plastid | 14.71 | 15.94 |
| CDY68338 | Canola | nucleus | 15.4 | 15.76 |
| CDX92339 | Canola | cytosol | 17.59 | 15.19 |
| CDY26951 | Canola | cytosol | 17.59 | 15.18 |
| CDY29719 | Canola | cytosol | 17.01 | 15.09 |
| CDY20344 | Canola | cytosol | 7.82 | 10.54 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | GO:A0A078D756 | InterPro:AP4_complex_esu | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDX84997 | ProteinID:CDX84997 | ProteinID:CDX84997.1 | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 |
| EnsemblPlantsGene:GSBRNA2T00142412001 | InterPro:IPR011989 | PFAM:PF01602 | PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 |
| SUPFAM:SSF48371 | UniParc:UPI0004EDB90A | SEG:seg | : | : | : |
Description
BnaC05g20580D
Coordinates
chrLK031839:-:1268166..1272133
Molecular Weight (calculated)
97989.4 Da
IEP (calculated)
6.302
GRAVY (calculated)
-0.195
Length
870 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGESRSKAE EDRIVLSEID ILKRKLLEPD VPKRKMKEYI IRLVYIEMLG HDASFGYIHA VKMTHDDNLL
101: LKRTGYLAVT LFLDEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAVCRLI NEETIPAVLP QVVDLLNHGK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: RKLCDSDPGV MGATLCPLFD LISEDVASYK DLVSSFVGIL KQVTERKLPK SYDYHQMPAP FIQIKLLKIM ALLSSGDKSA SDMMYMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCIIPSP KLLEDAAEAI SKFLKSDSHN LKYMGIDGLG RLIKISSDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADNKLRL SAVESYLQII SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ESILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYVSE RERSGGMFET TDYHSQDHHE VTSHALRFEA YELPKPSVPS QPSAALVPVP EPSYYSEPHQ
701: PISTSSSVSE RESSEIKLRL DGVKQKWGRP SYQSSTSALL LLLRKQQMVP VLTRMVVELP PHLAQNLEAV MNQRNQKSIM RNRDSQHPCL VDHHHRQDLI
801: ESHLLVVTNP QKEQLTNHLQ PSPRKVQSLY QTCSTLTSQL AQVMLQRRIL LKSWKGLWSL QGKMVVVQPM
101: LKRTGYLAVT LFLDEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAVCRLI NEETIPAVLP QVVDLLNHGK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: RKLCDSDPGV MGATLCPLFD LISEDVASYK DLVSSFVGIL KQVTERKLPK SYDYHQMPAP FIQIKLLKIM ALLSSGDKSA SDMMYMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCIIPSP KLLEDAAEAI SKFLKSDSHN LKYMGIDGLG RLIKISSDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADNKLRL SAVESYLQII SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ESILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYVSE RERSGGMFET TDYHSQDHHE VTSHALRFEA YELPKPSVPS QPSAALVPVP EPSYYSEPHQ
701: PISTSSSVSE RESSEIKLRL DGVKQKWGRP SYQSSTSALL LLLRKQQMVP VLTRMVVELP PHLAQNLEAV MNQRNQKSIM RNRDSQHPCL VDHHHRQDLI
801: ESHLLVVTNP QKEQLTNHLQ PSPRKVQSLY QTCSTLTSQL AQVMLQRRIL LKSWKGLWSL QGKMVVVQPM
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.