Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04102 | Sorghum | cytosol | 94.15 | 94.74 |
| Zm00001d025314_P001 | Maize | cytosol | 15.49 | 93.79 |
| Zm00001d042370_P003 | Maize | cytosol | 89.95 | 90.32 |
| Os01t0916200-02 | Rice | plasma membrane | 75.49 | 87.41 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 85.13 | 87.09 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 85.03 | 86.99 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 85.03 | 86.09 |
| TraesCS3A01G421500.1 | Wheat | golgi | 85.13 | 80.27 |
| Bra024739.1-P | Field mustard | cytosol | 21.13 | 78.33 |
| CDY70074 | Canola | cytosol | 50.77 | 78.32 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 65.33 | 77.31 |
| GSMUA_Achr11P... | Banana | cytosol | 68.62 | 71.86 |
| Bra023199.1-P | Field mustard | cytosol | 65.74 | 68.34 |
| AT1G31730.1 | Thale cress | cytosol | 65.03 | 67.59 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 66.26 | 67.15 |
| CDY42099 | Canola | cytosol | 64.62 | 66.74 |
| CDX84997 | Canola | cytosol | 58.36 | 65.4 |
| KRH07767 | Soybean | nucleus | 65.74 | 65.34 |
| KRH07246 | Soybean | nucleus | 65.74 | 65.34 |
| Solyc08g075310.2.1 | Tomato | cytosol | 64.62 | 65.08 |
| KRH76456 | Soybean | nucleus | 63.59 | 64.18 |
| KRH39774 | Soybean | nucleus | 62.87 | 59.63 |
| PGSC0003DMT400004931 | Potato | nucleus | 18.87 | 44.23 |
| Zm00001d045195_P002 | Maize | cytosol | 17.23 | 19.38 |
| Zm00001d051998_P003 | Maize | cytosol | 17.54 | 18.98 |
| Zm00001d036305_P003 | Maize | mitochondrion | 17.44 | 18.76 |
| Zm00001d048511_P008 | Maize | cytosol | 18.15 | 16.62 |
| Zm00001d027333_P018 | Maize | cytosol | 18.05 | 16.48 |
| Zm00001d023820_P001 | Maize | mitochondrion | 14.67 | 15.44 |
| Zm00001d041626_P001 | Maize | plastid | 14.67 | 15.2 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:103636362 | MapMan:22.5.2.2.1 | UniProt:A0A1D6G6A5 | InterPro:AP4_complex_esu | ProteinID:AQK98720.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 |
| InterPro:IPR011989 | PFAM:PF01602 | PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 |
| UniParc:UPI0008432042 | EnsemblPlantsGene:Zm00001d012061 | EnsemblPlants:Zm00001d012061_P005 | EnsemblPlants:Zm00001d012061_T005 | SEG:seg | : |
Description
AP-4 complex subunit epsilon
Coordinates
chr8:+:167515733..167528191
Molecular Weight (calculated)
106234.0 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.294
Length
975 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLRTFGRE LAMGSQGGWG QSKDFLDLVK SIGEARSKAE EDRIIARELE HLKRRLADPD VPRRKMKELL LRLVYAEMLG HDASFGHIHA VKMTHDESLP
101: LKRTGYLAVA LFLDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAACRLI GEEAIPAVLP QVVDLLVHPK EAVRKKAVMA LHRFYQRSSS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLYD LISEEPNSYK DLVVSFVNIL KQVAERRLPT SYDYHQMPAP FIQRQIKLLK ILAVLGSGDK QASGHMYTVL GDIFKKGDTA
301: SNIGNAILYE CICCISSIFP NPKMLVAAAE TTSKFLKSDS HNLKYMGIDA LGRLIKINPD IAEEHQLAVI DCLEDPDDTL KRKTFELLYK MTKSTNVEVI
401: VDRMIEYMIN ITDHHYKTEI ASRCVELAEQ FAPSNQWFIQ TMNRVFEHAG DLVNIRVAHN LMRLIAEGFG DEDEGADSQL RSSAVDSYVR IVGEPKLPSS
501: FLQIICWVLG EYGTADGKHS ASYIIGKLCD VAEAHLTDDT VKAYAISAIL KIFAFEIALG RRIDLLPECQ TLVDELLASH STDLQQRAYE LHALLGLGKN
601: DVESVMPADA SCEDIEVDRN LSFLDSYVQQ ALENGASPYI PESERSGLTS VGSYRSQEQQ ETSAHTLRFE AYEMPKPSLP LATSQTSMST PNTDLVPVSE
701: PGYYKEDHQT SRPQPPSDAV SGEFGVKLRL DGVQKKWGRS TYSSSTPSSS MSSQQTTNGA SHSDGGGPSS QPRESSYGSK RQQGTEVSAE KQRLAASLFG
801: SAAARADRKA QASRKTGKDS PSTEKVATTN VAAQSVKEQV IPAAAPPPDL LDLGDETVPS SRPSADPFSQ LVGLLGPASA APALSGTPAT TTSTSKAPDL
901: MSIFSDDVPT GVTSSGSTDP TPGDAISVSS HKGATAVAPK KGSSLQDALQ KDSTARQVGV TPTGNNPNLF KDLLG
101: LKRTGYLAVA LFLDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAACRLI GEEAIPAVLP QVVDLLVHPK EAVRKKAVMA LHRFYQRSSS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLYD LISEEPNSYK DLVVSFVNIL KQVAERRLPT SYDYHQMPAP FIQRQIKLLK ILAVLGSGDK QASGHMYTVL GDIFKKGDTA
301: SNIGNAILYE CICCISSIFP NPKMLVAAAE TTSKFLKSDS HNLKYMGIDA LGRLIKINPD IAEEHQLAVI DCLEDPDDTL KRKTFELLYK MTKSTNVEVI
401: VDRMIEYMIN ITDHHYKTEI ASRCVELAEQ FAPSNQWFIQ TMNRVFEHAG DLVNIRVAHN LMRLIAEGFG DEDEGADSQL RSSAVDSYVR IVGEPKLPSS
501: FLQIICWVLG EYGTADGKHS ASYIIGKLCD VAEAHLTDDT VKAYAISAIL KIFAFEIALG RRIDLLPECQ TLVDELLASH STDLQQRAYE LHALLGLGKN
601: DVESVMPADA SCEDIEVDRN LSFLDSYVQQ ALENGASPYI PESERSGLTS VGSYRSQEQQ ETSAHTLRFE AYEMPKPSLP LATSQTSMST PNTDLVPVSE
701: PGYYKEDHQT SRPQPPSDAV SGEFGVKLRL DGVQKKWGRS TYSSSTPSSS MSSQQTTNGA SHSDGGGPSS QPRESSYGSK RQQGTEVSAE KQRLAASLFG
801: SAAARADRKA QASRKTGKDS PSTEKVATTN VAAQSVKEQV IPAAAPPPDL LDLGDETVPS SRPSADPFSQ LVGLLGPASA APALSGTPAT TTSTSKAPDL
901: MSIFSDDVPT GVTSSGSTDP TPGDAISVSS HKGATAVAPK KGSSLQDALQ KDSTARQVGV TPTGNNPNLF KDLLG
001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
Arabidopsis Description
GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.