Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 91.01 | 98.74 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 90.91 | 98.64 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 91.49 | 98.23 |
| Zm00001d025314_P001 | Maize | cytosol | 14.41 | 92.55 |
| Os01t0916200-02 | Rice | plasma membrane | 71.57 | 87.89 |
| EES04102 | Sorghum | cytosol | 82.2 | 87.72 |
| Zm00001d012061_P005 | Maize | cytosol | 80.27 | 85.13 |
| Zm00001d042370_P003 | Maize | cytosol | 78.05 | 83.11 |
| CDY70074 | Canola | cytosol | 48.74 | 79.75 |
| Bra024739.1-P | Field mustard | cytosol | 20.12 | 79.09 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 62.09 | 77.91 |
| GSMUA_Achr11P... | Banana | cytosol | 65.18 | 72.4 |
| Bra023199.1-P | Field mustard | cytosol | 62.86 | 69.3 |
| AT1G31730.1 | Thale cress | cytosol | 62.67 | 69.08 |
| CDY42099 | Canola | cytosol | 62.09 | 68.01 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 63.15 | 67.88 |
| CDX84997 | Canola | cytosol | 56.19 | 66.78 |
| KRH07767 | Soybean | nucleus | 62.96 | 66.36 |
| KRH07246 | Soybean | nucleus | 62.96 | 66.36 |
| KRH76456 | Soybean | nucleus | 60.15 | 64.39 |
| Solyc08g075310.2.1 | Tomato | cytosol | 60.06 | 64.15 |
| KRH39774 | Soybean | nucleus | 59.38 | 59.73 |
| PGSC0003DMT400004931 | Potato | nucleus | 17.31 | 43.03 |
| TraesCS7A01G129800.3 | Wheat | peroxisome | 16.44 | 19.54 |
| TraesCS6A01G373200.1 | Wheat | mitochondrion | 15.96 | 18.5 |
| TraesCS5A01G557300.1 | Wheat | cytosol | 17.02 | 16.89 |
| TraesCS1A01G211900.1 | Wheat | plastid | 14.31 | 16.05 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | InterPro:AP4_complex_esu | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0015031 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 | InterPro:IPR011989 | PFAM:PF01602 |
| PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS3A01G421500 | EnsemblPlants:TraesCS3A01G421500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:662940226..662947205
Molecular Weight (calculated)
112627.0 Da
IEP (calculated)
7.142
GRAVY (calculated)
-0.421
Length
1034 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNRTRPPLEK AKQPRQKNKT KKKGKEERKP GRSPSTPRRN PPPPCPRPIQ ISHSPRPLTG GDPPAPACPG GRTHARTHAM EQLRTIGREL AMGSQGGWGQ
0101: SKEFLDLVKS IGEARSKAEE DRIISRELDH LKRRLADPDV PRRKMKELLL RLVYAEMLGH DASFGHIHAV KMTHDESLPL KRTGYLAVAL FIDERHDLVI
0201: LVVNTIQKDL RSDNYLVVCA ALTAASRLIG EEAIPAVLPQ VVDLLAHPKE AVRKKAVMAL HRFYQRSPSS VSHLVSNFRK RLCDNDPGVM GATLCPLYDL
0301: ILEDPNAYKD LVVSFVNILK QVAERRLPTS YDYHQMPAPF IQIKLLKILA VLGSGDKSAS GHMYTVLGDI FRKGDTASNI GNAILYECIC CVSCIFPNSK
0401: MLDAAAETTS KFLKSDSHNL KYMGIDALGR LIKINPDIAE QHQLAVIDCL EDPDDTLKRK TFELLYKMTK STNVEVIVDR MIEYMISITD HHYKAEIASR
0501: CVELAEQFAP SNQWFIQTMN KVFEHAGDLV NIRVAHNLMR LIAEGFGEED EGADSQLRSS AVNSYLRILG EPKLPSSFLQ IICWVLGEYG TADGKHPASY
0601: IIGKLCDVAE AHPTDDTVRG YAVSAILKIF AFEIAVGRKS DMLPEFQSLV DELSSSHSTD LQQRAYEVQA LLGLDKQAVE SVMPIDASCE DIEVDKNLTF
0701: LNSYVQQALE NGATPYIPES ERSGVVSVGN YRAQDQHETS AHALRFEAYE LPKPSLPTAT SQSSVSLPTT DLVPVPEPSH YREDHHQARS QQSGNAVSGE
0801: FGAKLRLDGV QKKWGRESYA SSSTPSSSTS SQQAANGGSN SDGGGLVTSQ ARESSYGSKS QQQGTEVSAE KQRLAASLFG SSAAKPNRKG HAGRKAAKES
0901: SSTEKVTPQP AKEQVTPAAP PPDLLDLGEE PVSSSAPSAD PFSQLDGLLG PASASPALSG TSAPSASNTP DLMSIFSDDV QTGATSASTE PAQKGATTKK
1001: GHSLQDALQK DATARQVGVT PTGNNPNLFK DLLG
0101: SKEFLDLVKS IGEARSKAEE DRIISRELDH LKRRLADPDV PRRKMKELLL RLVYAEMLGH DASFGHIHAV KMTHDESLPL KRTGYLAVAL FIDERHDLVI
0201: LVVNTIQKDL RSDNYLVVCA ALTAASRLIG EEAIPAVLPQ VVDLLAHPKE AVRKKAVMAL HRFYQRSPSS VSHLVSNFRK RLCDNDPGVM GATLCPLYDL
0301: ILEDPNAYKD LVVSFVNILK QVAERRLPTS YDYHQMPAPF IQIKLLKILA VLGSGDKSAS GHMYTVLGDI FRKGDTASNI GNAILYECIC CVSCIFPNSK
0401: MLDAAAETTS KFLKSDSHNL KYMGIDALGR LIKINPDIAE QHQLAVIDCL EDPDDTLKRK TFELLYKMTK STNVEVIVDR MIEYMISITD HHYKAEIASR
0501: CVELAEQFAP SNQWFIQTMN KVFEHAGDLV NIRVAHNLMR LIAEGFGEED EGADSQLRSS AVNSYLRILG EPKLPSSFLQ IICWVLGEYG TADGKHPASY
0601: IIGKLCDVAE AHPTDDTVRG YAVSAILKIF AFEIAVGRKS DMLPEFQSLV DELSSSHSTD LQQRAYEVQA LLGLDKQAVE SVMPIDASCE DIEVDKNLTF
0701: LNSYVQQALE NGATPYIPES ERSGVVSVGN YRAQDQHETS AHALRFEAYE LPKPSLPTAT SQSSVSLPTT DLVPVPEPSH YREDHHQARS QQSGNAVSGE
0801: FGAKLRLDGV QKKWGRESYA SSSTPSSSTS SQQAANGGSN SDGGGLVTSQ ARESSYGSKS QQQGTEVSAE KQRLAASLFG SSAAKPNRKG HAGRKAAKES
0901: SSTEKVTPQP AKEQVTPAAP PPDLLDLGEE PVSSSAPSAD PFSQLDGLLG PASASPALSG TSAPSASNTP DLMSIFSDDV QTGATSASTE PAQKGATTKK
1001: GHSLQDALQK DATARQVGVT PTGNNPNLFK DLLG
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.