Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH07246 | Soybean | nucleus | 96.13 | 96.13 |
CDY70074 | Canola | cytosol | 54.54 | 84.65 |
Bra024739.1-P | Field mustard | cytosol | 21.81 | 81.37 |
KRH76456 | Soybean | nucleus | 80.02 | 81.26 |
Zm00001d025314_P001 | Maize | cytosol | 12.54 | 76.4 |
VIT_02s0087g00690.t01 | Wine grape | nucleus | 74.62 | 76.09 |
KRH39774 | Soybean | nucleus | 79.41 | 75.78 |
GSMUA_Achr8P08830_001 | Banana | cytosol | 62.59 | 74.51 |
AT1G31730.1 | Thale cress | cytosol | 69.32 | 72.49 |
Bra023199.1-P | Field mustard | cytosol | 68.91 | 72.07 |
Solyc08g075310.2.1 | Tomato | cytosol | 70.54 | 71.49 |
CDY42099 | Canola | cytosol | 67.99 | 70.66 |
GSMUA_Achr11P... | Banana | cytosol | 66.26 | 69.82 |
CDX84997 | Canola | cytosol | 61.47 | 69.31 |
TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 66.46 | 68.42 |
TraesCS3D01G417200.1 | Wheat | cytosol | 66.26 | 68.21 |
EES04102 | Sorghum | cytosol | 66.97 | 67.8 |
HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 66.06 | 67.29 |
Os01t0916200-02 | Rice | plasma membrane | 57.39 | 66.86 |
Zm00001d012061_P005 | Maize | cytosol | 65.34 | 65.74 |
Zm00001d042370_P003 | Maize | cytosol | 63.61 | 64.26 |
TraesCS3A01G421500.1 | Wheat | golgi | 66.36 | 62.96 |
PGSC0003DMT400004931 | Potato | nucleus | 22.12 | 52.16 |
KRH69527 | Soybean | mitochondrion | 19.06 | 21.42 |
KRH74623 | Soybean | mitochondrion | 18.86 | 21.24 |
KRH45711 | Soybean | cytosol, mitochondrion | 18.45 | 20.54 |
KRH26563 | Soybean | endoplasmic reticulum | 16.92 | 16.27 |
KRH22743 | Soybean | cytosol, endoplasmic reticulum | 16.82 | 16.18 |
KRH41691 | Soybean | cytosol | 14.98 | 16.05 |
KRH60392 | Soybean | cytosol | 15.09 | 15.15 |
KRG99303 | Soybean | nucleus | 2.14 | 11.67 |
KRH25154 | Soybean | cytosol | 3.77 | 9.09 |
Protein Annotations
Gene3D:1.25.10.10 | EntrezGene:100806914 | MapMan:22.5.2.2.1 | EMBL:ACUP02010098 | InterPro:AP4_complex_esu | InterPro:ARM-like |
InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | EnsemblPlantsGene:GLYMA_16G109200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 |
InterPro:IPR011989 | UniProt:K7MGK0 | EnsemblPlants:KRH07767 | ProteinID:KRH07767 | ProteinID:KRH07767.1 | PFAM:PF01602 |
PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | UniParc:UPI000233B4B4 | SEG:seg |
Description
hypothetical protein
Coordinates
chr16:+:23111690..23133677
Molecular Weight (calculated)
107765.0 Da
IEP (calculated)
5.997
GRAVY (calculated)
-0.274
Length
981 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLKTIGRE LAMGSQGGFG QSKEFLELVK SIGESRSKAE EDRIVLREIE TLKRRIAEPD IPKRKMKEYI IRLLYVEMLG HDASFGHIHA VKMTHDDSLL
101: LKRTGYLAVT LLLNDDDDLI ILIVNTIQKD LKSDNYLVVC AALSAVCRLI NEETIPAVLP SVVDLLAHPK DAVRKKAVMA LHRFHHKSPS SVSHLISNFR
201: KKLCDNDPGV MGATLCPLFD LIAVDPSPYK DLVVSFVSIL KQVAEHRLPK SYDYHQMPAP FIQIKLLKIL ALLGSGDKQA SEQMYTVIGE IIRKGDSSSN
301: IGNAILYGCI CCVSSIYPNA KLLEAAADVN AKFLKSDSHN LKYMGIDALG RLIKISPHVA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIS DDHYKTYIAS RCVELAEQFA PSNHWFIQTM NKVFEHAGDL VNIKVAHNLM RLIGEGFGED DDAAYSQLRS SAVESYLQII GEPKLPSAFL
501: QVICWVLGEY GTADGKYSAS YITGKLCDVA EAYSNDETVK AYAVSALTKI YAFEIAAGRK VDMLPECLSF IEELLASHST DLQQRAYELQ ALIGLDARAV
601: ETIMPQDASC EDIEVDKNLS FLYEYVQQSL ERGALPYIPE DERNGMVNVS NFRSQDQHES AQHGLRFEAY EVPKPPMPSK LAPVSLSSST DLVPVPEPLY
701: SRETHPISSM GASETGSSGL KLKLDGVQKK WGRPIYSSPA SSSSTSTSQN SVNGVTQMDV ATAVNSKGRD NYDRRKQRIE ISPEKQKLAD KLFGGSTKTE
801: KRSSTSNKVP KASTSAADRT QESKAAAVPS EVAREKTNQQ SPPPDLLDLG EPTVTVAPPS VDPFKQLEGL LDPNLSSTAN RSGAAVTNAP DIMALYAETP
901: ESRESGSGDY SIPVRGDNVN LLSEFSNAAA RGTTVETTVT PLSQSVKGPN VKDSLQKDAK VRKMGVTPSG QNPNLFSDLL G
101: LKRTGYLAVT LLLNDDDDLI ILIVNTIQKD LKSDNYLVVC AALSAVCRLI NEETIPAVLP SVVDLLAHPK DAVRKKAVMA LHRFHHKSPS SVSHLISNFR
201: KKLCDNDPGV MGATLCPLFD LIAVDPSPYK DLVVSFVSIL KQVAEHRLPK SYDYHQMPAP FIQIKLLKIL ALLGSGDKQA SEQMYTVIGE IIRKGDSSSN
301: IGNAILYGCI CCVSSIYPNA KLLEAAADVN AKFLKSDSHN LKYMGIDALG RLIKISPHVA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIS DDHYKTYIAS RCVELAEQFA PSNHWFIQTM NKVFEHAGDL VNIKVAHNLM RLIGEGFGED DDAAYSQLRS SAVESYLQII GEPKLPSAFL
501: QVICWVLGEY GTADGKYSAS YITGKLCDVA EAYSNDETVK AYAVSALTKI YAFEIAAGRK VDMLPECLSF IEELLASHST DLQQRAYELQ ALIGLDARAV
601: ETIMPQDASC EDIEVDKNLS FLYEYVQQSL ERGALPYIPE DERNGMVNVS NFRSQDQHES AQHGLRFEAY EVPKPPMPSK LAPVSLSSST DLVPVPEPLY
701: SRETHPISSM GASETGSSGL KLKLDGVQKK WGRPIYSSPA SSSSTSTSQN SVNGVTQMDV ATAVNSKGRD NYDRRKQRIE ISPEKQKLAD KLFGGSTKTE
801: KRSSTSNKVP KASTSAADRT QESKAAAVPS EVAREKTNQQ SPPPDLLDLG EPTVTVAPPS VDPFKQLEGL LDPNLSSTAN RSGAAVTNAP DIMALYAETP
901: ESRESGSGDY SIPVRGDNVN LLSEFSNAAA RGTTVETTVT PLSQSVKGPN VKDSLQKDAK VRKMGVTPSG QNPNLFSDLL G
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.