CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025314_P001	Maize	cytosol	15.79	95.03
Zm00001d012061_P005	Maize	cytosol	94.74	94.15
Zm00001d042370_P003	Maize	cytosol	93.7	93.51
Os01t0916200-02	Rice	plasma membrane	79.15	91.09
TraesCS3B01G457300.1	Wheat	cytosol, nucleus, plastid	87.72	89.19
TraesCS3D01G417200.1	Wheat	cytosol	87.62	89.09
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	87.41	87.95
TraesCS3A01G421500.1	Wheat	golgi	87.72	82.2
Bra024739.1-P	Field mustard	cytosol	21.77	80.23
CDY70074	Canola	cytosol	52.22	80.06
GSMUA_Achr8P08830_001	Banana	cytosol	67.6	79.49
GSMUA_Achr11P...	Banana	cytosol	71.41	74.33
Bra023199.1-P	Field mustard	cytosol	67.91	70.15
AT1G31730.1	Thale cress	cytosol	67.6	69.83
VIT_02s0087g00690.t01	Wine grape	nucleus	68.42	68.92
CDY42099	Canola	cytosol	66.87	68.64
KRH07246	Soybean	nucleus	67.91	67.07
KRH07767	Soybean	nucleus	67.8	66.97
CDX84997	Canola	cytosol	60.06	66.9
Solyc08g075310.2.1	Tomato	cytosol	66.05	66.12
KRH76456	Soybean	nucleus	65.53	65.73
KRH39774	Soybean	nucleus	65.02	61.28
PGSC0003DMT400004931	Potato	nucleus	19.4	45.19
KXG19397	Sorghum	cytosol, plastid	17.44	19.34
KXG31353	Sorghum	cytosol	17.54	18.87
KXG40365	Sorghum	cytosol	18.58	17.24
EES17171	Sorghum	plastid	15.17	15.51
KXG20021	Sorghum	cytosol	10.11	14.0
EER88616	Sorghum	cytosol	7.22	13.73
EES14423	Sorghum	cytosol	3.51	12.41

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.5.2.2.1	EntrezGene:8059353	InterPro:AP4_complex_esu	InterPro:ARM-like	InterPro:ARM-type_fold
UniProt:C5XG75	InterPro:Clathrin/coatomer_adapt-like_N	EnsemblPlants:EES04102	ProteinID:EES04102	ProteinID:EES04102.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005829	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009506	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030124	InterPro:IPR011989	PFAM:PF01602
PIRSF:PIRSF037097	PANTHER:PTHR22780	PANTHER:PTHR22780:SF13	EnsemblPlantsGene:SORBI_3003G401000	SUPFAM:SSF48371	unigene:Sbi.14916
UniParc:UPI0001A85547	RefSeq:XP_002458982.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:70953730..70962190

Molecular Weight (calculated)

105571.0 Da

IEP (calculated)

5.645

GRAVY (calculated)

-0.283

Length

969 amino acids

Sequence
(BLAST)

001: MEQLRTIGRE LAMGSQGGWG QSKEFLDLVK SIGEARSKAE EDRIIARELE HLKRRLADPD VPRRKMKELL LRLVYAEMLG HDASFGHIHA VKMTHDESLP
101: LKRTGYLAVA LFLDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAACRLI GEEAIPAVLP QVVELLAHPK EAVRKKAVMA LHRFYQRSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLYD LILEEPNSYK DLVVSFVNIL KQVAERRLPT SYDYHQMPAP FIQIKLLKIL AVLGSGDKQA SGHMYTVLGD IFRKGDTASN
301: IGNAILYECI CCISSIFPNP KMLEAAAETT SKFLKSDSHN LKYMGIDALG RLIKINPDIA EEHQLAVIDC LEDPDDTLKR KTFELLYKMT KSTNVEVIVD
401: RMIEYMINIT DHHYKTEIAS RCVELAEQFA PSNQWFIQTM NKVFEHAGDL VNIRVAHNLM RLIAEGFGEE DEGADSQLRS SAVDSYLRIV GEPKLPSSFL
501: QIICWVLGEY GTADGKYSAS YIIGKLCDVA EAHLTDDTVK AYAISAILKI FAFEIALGRK IDLLPECQTL VDELSASHST DLQQRAYELQ ALLGLDKNAV
601: ESVMPADASC EDIEVDRNLS FLNSYVQQAL ENGASPYIPE SERSGVISVG SYRSQEQQET SAHTLRFEAY EMPKPSLPLA TSQTSISTPT TDLVPVPETG
701: YYKEDHQTSR SQPPGDAVSG EFGVKLRLDG VQKKWGRPTY SSSTPSSSTS SQQTTNGTSH SDGGGSSSQP RESSYGSKRQ QGTEVSAEKQ RLAASLFGSA
801: AAKADRKAQA SRKTAKDSPS TEKVATTNVT AQPVKEQVIP AAPPPDLLDL GDEPVSSNPP LADPFSQLEG LLGPASAAPV LSGTPATGAS KAPDLMSIFS
901: DDVPTGVASG STDPTLGDVN STSSHKGATA VASKKGPSLQ DALQKDATAR QVGVTPTGNN PNLFKDLLG

Best Arabidopsis Sequence Match ( AT1G31730.1 )
(BLAST)

001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG

Arabidopsis Description

AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.