Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19397 | Sorghum | cytosol, plastid | 93.27 | 96.68 |
| Zm00001d045195_P002 | Maize | cytosol | 91.83 | 95.96 |
| Os06t0167100-01 | Rice | plasma membrane | 87.31 | 90.92 |
| TraesCS7B01G029800.2 | Wheat | cytosol | 84.77 | 88.28 |
| HORVU7Hr1G027050.3 | Barley | cytosol | 84.44 | 88.03 |
| TraesCS7D01G128900.2 | Wheat | cytosol | 84.22 | 87.7 |
| TraesCS7A01G129800.3 | Wheat | peroxisome | 84.11 | 87.59 |
| GSMUA_Achr10P... | Banana | mitochondrion | 31.13 | 83.68 |
| Zm00001d051998_P003 | Maize | cytosol | 78.59 | 79.02 |
| CDX91727 | Canola | mitochondrion | 10.38 | 78.33 |
| GSMUA_Achr9P18340_001 | Banana | mitochondrion | 72.96 | 76.59 |
| GSMUA_Achr3P10470_001 | Banana | cytosol, mitochondrion | 72.52 | 76.13 |
| VIT_01s0026g00310.t01 | Wine grape | mitochondrion | 68.87 | 71.07 |
| KRH69527 | Soybean | mitochondrion | 66.89 | 69.42 |
| KRH74623 | Soybean | mitochondrion | 66.45 | 69.12 |
| CDY59088 | Canola | mitochondrion | 65.56 | 68.12 |
| Bra024627.1-P | Field mustard | mitochondrion | 65.56 | 68.12 |
| CDY47649 | Canola | mitochondrion | 65.34 | 67.89 |
| CDY28466 | Canola | mitochondrion | 65.45 | 67.85 |
| Solyc04g025870.2.1 | Tomato | plastid | 65.67 | 67.84 |
| CDY25807 | Canola | mitochondrion | 65.45 | 67.77 |
| Bra012393.1-P | Field mustard | mitochondrion | 65.12 | 67.51 |
| AT1G23900.2 | Thale cress | mitochondrion | 64.9 | 67.12 |
| PGSC0003DMT400010532 | Potato | cytosol, mitochondrion | 65.01 | 67.01 |
| Solyc05g005780.2.1 | Tomato | nucleus | 64.9 | 66.89 |
| AT1G60070.2 | Thale cress | cytosol, mitochondrion | 65.56 | 66.15 |
| KRH45711 | Soybean | cytosol, mitochondrion | 64.24 | 66.06 |
| CDY24514 | Canola | cytosol | 14.35 | 64.36 |
| CDY33619 | Canola | mitochondrion | 30.35 | 60.44 |
| GSMUA_Achr10P... | Banana | cytosol | 22.74 | 56.13 |
| Bra031528.1-P | Field mustard | mitochondrion | 12.47 | 51.83 |
| KRG99303 | Soybean | nucleus | 7.95 | 40.0 |
| Zm00001d025314_P001 | Maize | cytosol | 4.08 | 22.98 |
| Zm00001d027333_P018 | Maize | cytosol | 23.84 | 20.22 |
| Zm00001d048511_P008 | Maize | cytosol | 23.51 | 20.0 |
| Zm00001d012061_P005 | Maize | cytosol | 18.76 | 17.44 |
| Zm00001d042370_P003 | Maize | cytosol | 17.99 | 16.79 |
| Zm00001d023820_P001 | Maize | mitochondrion | 15.34 | 15.01 |
| Zm00001d041626_P001 | Maize | plastid | 15.34 | 14.77 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100501945 | Gene3D:2.60.40.1230 | MapMan:22.1.2.1 | UniProt:A0A1D6LLN3 | InterPro:AP1_complex_gsu |
| ProteinID:AQK80603.1 | ProteinID:AQK80604.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a/b/g-adaptin_app_Ig |
| InterPro:Clathrin_app_Ig-like_sf | InterPro:GAE_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 |
| GO:GO:0030121 | GO:GO:0030131 | GO:GO:0031410 | InterPro:IPR008153 | InterPro:IPR011989 | PFAM:PF01602 |
| PFAM:PF02883 | PIRSF:PIRSF037094 | PFscan:PS50180 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF27 | SMART:SM00809 |
| SUPFAM:SSF48371 | SUPFAM:SSF49348 | UniParc:UPI0008429D27 | EnsemblPlantsGene:Zm00001d036305 | EnsemblPlants:Zm00001d036305_P003 | EnsemblPlants:Zm00001d036305_T003 |
| SEG:seg | : | : | : | : | : |
Description
AP-1 complex subunit gamma-1
Coordinates
chr6:+:83674293..83683920
Molecular Weight (calculated)
99180.9 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.023
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSARPAAVV FLVRLCGSEI PRRPALDSVE RIVEDFAMDL AINPFSSGTR LRDMIRAIRA CKTAAEERAV VRRECAAIRA AISEGDQDYR HRNMAKLMFI
101: HMLGYPTHFG QMECLKLIAA AGFPEKRIGY LGLMLLLDER QEVLMLVTNS LKQDLNHSNQ FIVGLALCAL GNICSAEMAR DLAPEVERLL QNRDPNTKKK
201: AALCSIRIVR KVPDLAENFM SAAASLLKEK HHGVLISAVQ LCMELCKASH EALEYLRKNC LEGLVRILRD VSNSSYAPEY DIGGITDPFL HIRVLKLMRI
301: LGQGDADCSE YINDILAQVV STKTESNKNA GNAILYECVE TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNMLMK AIAVDTQAVQ RHRATILECV
401: KDADVSIRKR ALELVYLLVN DTNVKPLTKE LVDYLEVSDQ DFKEDLTAKI CSIVEKFSLD KLWYLDQMFR VLSLAGNYVK DDVWHALIVL MSNASELQGY
501: SIRSLYKALQ ASGEQESLVR VAIWCIGEYG EMLVNNLSML DMEEPITVTE SDAVDAVEIA LQRYSADVTT RAMCLVSLLK LSSRFPPTSE RIKEIVAQNK
601: GNTVLELQQR SIEFSSIIQR HQSIKSSLLE RMPALDEANY LVKRAASTQA AVSSVNSAPA VTSGGPLKLP NGVAKPPPAP LADLLDLGSD DAPVTTSAPT
701: TSPNDFLQDL LGIGLTDSSP IGGAPSTSTD ILMDLLSIGS SPVQNGPPTS NFSLPGIETK PPPVTPQVVD LLDGLSSSTS LPDENAAYPT ITAFQSATLR
801: ITFSFKKQPG KPQETTINAS FTNLATTALT DFVFQAAVPK FIQLRLDPAS SSTLPASGNV SVTQSLSVTN NQHGQKPLAM RIRMSYKVNG EDRLEQGQIS
901: NFPSGL
101: HMLGYPTHFG QMECLKLIAA AGFPEKRIGY LGLMLLLDER QEVLMLVTNS LKQDLNHSNQ FIVGLALCAL GNICSAEMAR DLAPEVERLL QNRDPNTKKK
201: AALCSIRIVR KVPDLAENFM SAAASLLKEK HHGVLISAVQ LCMELCKASH EALEYLRKNC LEGLVRILRD VSNSSYAPEY DIGGITDPFL HIRVLKLMRI
301: LGQGDADCSE YINDILAQVV STKTESNKNA GNAILYECVE TIMGIEATSG LRVLAINILG RFLSNRDNNI RYVALNMLMK AIAVDTQAVQ RHRATILECV
401: KDADVSIRKR ALELVYLLVN DTNVKPLTKE LVDYLEVSDQ DFKEDLTAKI CSIVEKFSLD KLWYLDQMFR VLSLAGNYVK DDVWHALIVL MSNASELQGY
501: SIRSLYKALQ ASGEQESLVR VAIWCIGEYG EMLVNNLSML DMEEPITVTE SDAVDAVEIA LQRYSADVTT RAMCLVSLLK LSSRFPPTSE RIKEIVAQNK
601: GNTVLELQQR SIEFSSIIQR HQSIKSSLLE RMPALDEANY LVKRAASTQA AVSSVNSAPA VTSGGPLKLP NGVAKPPPAP LADLLDLGSD DAPVTTSAPT
701: TSPNDFLQDL LGIGLTDSSP IGGAPSTSTD ILMDLLSIGS SPVQNGPPTS NFSLPGIETK PPPVTPQVVD LLDGLSSSTS LPDENAAYPT ITAFQSATLR
801: ITFSFKKQPG KPQETTINAS FTNLATTALT DFVFQAAVPK FIQLRLDPAS SSTLPASGNV SVTQSLSVTN NQHGQKPLAM RIRMSYKVNG EDRLEQGQIS
901: NFPSGL
001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL
Arabidopsis Description
Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.