CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99303	Soybean	nucleus	55.83	37.22
GSMUA_Achr10P...	Banana	mitochondrion	75.83	27.0
Os02t0805000-01	Rice	cytosol, plasma membrane	74.17	18.2
CDY20343	Canola	cytosol	33.33	12.82
CDY28466	Canola	mitochondrion	90.83	12.47
CDY25807	Canola	mitochondrion	90.83	12.46
CDY59088	Canola	mitochondrion	88.33	12.16
CDY47649	Canola	mitochondrion	88.33	12.16
KRH74623	Soybean	mitochondrion	84.17	11.6
KRH69527	Soybean	mitochondrion	83.33	11.45
Solyc04g025870.2.1	Tomato	plastid	83.33	11.4
KRH45711	Soybean	cytosol, mitochondrion	83.33	11.35
VIT_01s0026g00310.t01	Wine grape	mitochondrion	82.5	11.28
AT1G60070.2	Thale cress	cytosol, mitochondrion	83.33	11.14
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	80.0	11.12
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	80.83	11.04
Solyc05g005780.2.1	Tomato	nucleus	80.83	11.04
GSMUA_Achr9P18340_001	Banana	mitochondrion	79.17	11.01
Zm00001d045195_P002	Maize	cytosol	78.33	10.84
HORVU7Hr1G027050.3	Barley	cytosol	78.33	10.82
Os06t0167100-01	Rice	plasma membrane	78.33	10.8
KXG19397	Sorghum	cytosol, plastid	78.33	10.76
TraesCS7B01G029800.2	Wheat	cytosol	77.5	10.69
TraesCS7D01G128900.2	Wheat	cytosol	76.67	10.57
TraesCS7A01G129800.3	Wheat	peroxisome	76.67	10.57
Zm00001d036305_P003	Maize	mitochondrion	78.33	10.38
TraesCS6B01G410900.2	Wheat	cytosol	75.0	10.04
TraesCS6D01G357400.1	Wheat	golgi	75.0	10.03
TraesCS6A01G373200.1	Wheat	mitochondrion	74.17	9.98
Zm00001d051998_P003	Maize	cytosol	74.17	9.88
KXG31353	Sorghum	cytosol	72.5	9.66
HORVU6Hr1G087920.7	Barley	mitochondrion	75.0	8.97
CDY70074	Canola	cytosol	25.0	4.75
CDY29719	Canola	cytosol	35.0	4.28
CDX92339	Canola	cytosol	35.0	4.17
CDY26951	Canola	cytosol	35.0	4.17
CDX84997	Canola	cytosol	26.67	3.68
HORVU7Hr1G050510.16	Barley	cytosol	5.0	3.66
CDY04318	Canola	cytosol, nucleus, plastid	23.33	3.49
CDY24454	Canola	cytosol	24.17	3.4
CDY42099	Canola	cytosol	26.67	3.39
CDY68338	Canola	nucleus	22.5	3.18
CDX92225	Canola	cytosol, nucleus, plastid	22.5	3.15
HORVU3Hr1G040310.1	Barley	cytosol	1.67	1.12
CDY33619	Canola	mitochondrion	4.17	1.1
GSMUA_Achr10P...	Banana	cytosol	2.5	0.82
CDY24514	Canola	cytosol	0.83	0.5
CDY20344	Canola	cytosol	1.67	0.31
HORVU5Hr1G019420.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G053020.1	Barley	cytosol	0.0	0.0
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078DS37	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDX91727
ProteinID:CDX91727	ProteinID:CDX91727.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	EnsemblPlantsGene:GSBRNA2T00153228001	InterPro:IPR011989	PFAM:PF01602
PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI0004EE27CE	:	:

Description

BnaC08g06460D

Coordinates

chrLK031869:+:565466..565931

Molecular Weight (calculated)

14015.5 Da

IEP (calculated)

9.281

GRAVY (calculated)

-0.331

Length

120 amino acids

Sequence
(BLAST)

001: MNPFSSTTRL RDMIRSIRAC KTAAEERGVM RKECADIRAS INENEPHDRH MNLAKLMLIH MLGYPTHFGQ MECLKLISSP GFPEKRIGYL RLMLLLDERQ
101: EVLMLLTNSL KQYPLHEKMI

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.