Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91727 Canola mitochondrion 11.14 83.33
CDY24514 Canola cytosol 18.04 80.2
GSMUA_Achr10P... Banana mitochondrion 29.73 79.23
KRH74623 Soybean mitochondrion 75.39 77.73
VIT_01s0026g00310.t01 Wine grape mitochondrion 75.95 77.68
KRH69527 Soybean mitochondrion 75.06 77.2
CDY33619 Canola mitochondrion 39.09 77.14
Os02t0805000-01 Rice cytosol, plasma membrane 40.87 75.05
KRH45711 Soybean cytosol, mitochondrion 73.16 74.57
AT1G23900.2 Thale cress mitochondrion 72.61 74.43
Solyc04g025870.2.1 Tomato plastid 72.38 74.12
PGSC0003DMT400010532 Potato cytosol, mitochondrion 72.38 73.95
Solyc05g005780.2.1 Tomato nucleus 71.83 73.38
HORVU5Hr1G019420.1 Barley cytosol 6.79 71.76
HORVU1Hr1G048590.1 Barley cytosol, mitochondrion 6.68 70.59
HORVU3Hr1G053020.1 Barley cytosol 6.68 70.59
GSMUA_Achr9P18340_001 Banana mitochondrion 67.48 70.22
GSMUA_Achr3P10470_001 Banana cytosol, mitochondrion 66.93 69.64
Os06t0167100-01 Rice plasma membrane 66.7 68.85
HORVU7Hr1G027050.3 Barley cytosol 66.37 68.58
TraesCS7D01G128900.2 Wheat cytosol 66.04 68.16
TraesCS7A01G129800.3 Wheat peroxisome 65.81 67.93
KXG19397 Sorghum cytosol, plastid 65.92 67.73
TraesCS7B01G029800.2 Wheat cytosol 65.59 67.7
Zm00001d045195_P002 Maize cytosol 64.92 67.24
TraesCS6A01G373200.1 Wheat mitochondrion 65.14 65.58
Zm00001d036305_P003 Maize mitochondrion 66.15 65.56
TraesCS6D01G357400.1 Wheat golgi 64.59 64.66
TraesCS6B01G410900.2 Wheat cytosol 64.14 64.29
HORVU3Hr1G040310.1 Barley cytosol 12.69 63.69
KXG31353 Sorghum cytosol 63.59 63.37
Zm00001d051998_P003 Maize cytosol 63.14 62.93
Bra031528.1-P Field mustard mitochondrion 15.26 62.84
HORVU7Hr1G050510.16 Barley cytosol 10.91 59.76
HORVU6Hr1G087920.7 Barley mitochondrion 65.26 58.42
GSMUA_Achr10P... Banana cytosol 21.38 52.32
KRG99303 Soybean nucleus 7.91 39.44
AT5G22770.1 Thale cress cytosol 25.28 22.43
AT5G22780.1 Thale cress cytosol 24.94 22.11
AT1G31730.1 Thale cress cytosol 19.71 18.87
AT1G48760.2 Thale cress cytosol 15.81 16.34
Protein Annotations
Gene3D:1.25.10.10MapMan:22.1.2.1EntrezGene:842301ProteinID:AEE33656.1InterPro:AP1_complex_gsuInterPro:ARM-like
InterPro:ARM-type_foldArrayExpress:AT1G60070EnsemblPlantsGene:AT1G60070RefSeq:AT1G60070TAIR:AT1G60070RefSeq:AT1G60070-TAIR-G
EnsemblPlants:AT1G60070.2TAIR:AT1G60070.2Unigene:At.24122InterPro:Clathrin/coatomer_adapt-like_NInterPro:Clathrin_a/b/g-adaptin_app_IgInterPro:Clathrin_app_Ig-like_sf
UniProt:F4IEP9InterPro:GAE_domGO:GO:0003674GO:GO:0005215GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005794GO:GO:0005829GO:GO:0006810
GO:GO:0006886GO:GO:0008150GO:GO:0008565GO:GO:0015031GO:GO:0016020GO:GO:0016192
GO:GO:0030117GO:GO:0030121GO:GO:0030131GO:GO:0031410InterPro:IPR008153InterPro:IPR011989
RefSeq:NP_001185270.1PFAM:PF01602PFAM:PF02883PIRSF:PIRSF037094PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50180PANTHER:PTHR22780
PANTHER:PTHR22780:SF27SMART:SM00809SUPFAM:SSF48371SUPFAM:SSF49348UniParc:UPI0001E92BA4SEG:seg
Description
Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
Coordinates
chr1:-:22142604..22149527
Molecular Weight (calculated)
98824.4 Da
IEP (calculated)
6.378
GRAVY (calculated)
-0.076
Length
898 amino acids
Sequence
(BLAST)
001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKNN
801: SAMCLVLNVP HFYGRDSDRF MFFAKFLLVE ILGTFLQLHL DPASSNSLPA NGNIKQTMRV TNSQKGKKPI VMRMRVGYKI NGKDVLEEGQ INNFPRGL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.