Factsheet for AT5G22780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G22770.1	Thale cress	cytosol	98.52	98.62
CDX92339	Canola	cytosol	94.57	95.13
CDY26951	Canola	cytosol	94.57	95.04
Bra002427.1-P	Field mustard	cytosol	94.47	95.03
Solyc11g066760.1.1	Tomato	cytosol	42.45	92.08
GSMUA_Achr5P15260_001	Banana	cytosol	11.55	89.31
Os03t0112101-00	Rice	plasma membrane	33.86	87.95
VIT_06s0061g01170.t01	Wine grape	cytosol	82.03	81.87
KRH22743	Soybean	cytosol, endoplasmic reticulum	82.23	81.67
KRH26563	Soybean	endoplasmic reticulum	82.03	81.47
Solyc06g074650.2.1	Tomato	plastid	80.75	80.43
GSMUA_Achr1P01770_001	Banana	cytosol	77.49	76.59
KXG40365	Sorghum	cytosol	76.41	74.14
TraesCS4B01G395700.3	Wheat	cytosol, unclear	74.04	72.05
TraesCS5A01G557300.1	Wheat	cytosol	73.84	71.78
Zm00001d048511_P008	Maize	cytosol	74.93	71.27
Zm00001d027333_P018	Maize	cytosol	75.12	71.25
HORVU4Hr1G089310.1	Barley	cytosol	72.26	68.93
Solyc11g066770.1.1	Tomato	cytosol	29.32	68.43
Os03t0112400-01	Rice	cytosol	9.87	65.36
GSMUA_Achr5P15250_001	Banana	cytosol	63.67	64.95
AT1G23900.2	Thale cress	mitochondrion	21.82	25.23
AT1G60070.2	Thale cress	cytosol, mitochondrion	22.11	24.94
AT1G31730.1	Thale cress	cytosol	16.49	17.8
AT1G48760.2	Thale cress	cytosol	13.62	15.88

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.3.1	Gene3D:3.30.310.10	EntrezGene:832341	ProteinID:AED93075.1
ProteinID:ANM68365.1	InterPro:AP2_complex_asu	InterPro:ARM-like	InterPro:ARM-type_fold	ArrayExpress:AT5G22780	EnsemblPlantsGene:AT5G22780
RefSeq:AT5G22780	TAIR:AT5G22780	RefSeq:AT5G22780-TAIR-G	EnsemblPlants:AT5G22780.1	TAIR:AT5G22780.1	EMBL:AY099646
ProteinID:BAB10137.1	InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a-adaptin_app_sub_C	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:Coatomer/calthrin_app_sub_C
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0005905	GO:GO:0006810	GO:GO:0006886
GO:GO:0006897	GO:GO:0008150	GO:GO:0008289	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030131	GO:GO:0035615	GO:GO:0072583	InterPro:IPR011989
InterPro:IPR012295	RefSeq:NP_001330127.1	RefSeq:NP_197670.1	PFAM:PF01602	PFAM:PF02296	PFAM:PF02883
PIRSF:PIRSF037091	PO:PO:0000005	PO:PO:0000293	PANTHER:PTHR22780	PANTHER:PTHR22780:SF4	UniProt:Q8LPK4
SMART:SM00809	SUPFAM:SSF48371	SUPFAM:SSF49348	SUPFAM:SSF55711	InterPro:TBP_dom_sf	UniParc:UPI00000A2CD9
SEG:seg	:	:	:	:	:

Description

ALPHAC-ADAP-2 complex subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK4]

Coordinates

chr5:-:7589403..7598113

Molecular Weight (calculated)

112305.0 Da

IEP (calculated)

6.143

GRAVY (calculated)

-0.091

Length

1013 amino acids

Sequence
(BLAST)

0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.