Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G002410.2 | |
| HORVU2Hr1G002480.5 | |
| HORVU4Hr1G019290.1 | |
| HORVU4Hr1G024710.4 | plasma membrane |
| HORVU4Hr1G045980.10 | |
| HORVU5Hr1G033310.1 | golgi |
| HORVU5Hr1G048010.1 | plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0112101-00 | Rice | plasma membrane | 36.35 | 98.97 |
| TraesCS5A01G557300.1 | Wheat | cytosol | 92.75 | 94.53 |
| TraesCS4B01G395700.3 | Wheat | cytosol, unclear | 92.56 | 94.43 |
| GSMUA_Achr5P15260_001 | Banana | cytosol | 11.21 | 90.84 |
| Solyc11g066760.1.1 | Tomato | cytosol | 38.98 | 88.65 |
| CDY20343 | Canola | cytosol | 25.8 | 87.82 |
| KXG40365 | Sorghum | cytosol | 84.28 | 85.73 |
| Zm00001d027333_P018 | Maize | cytosol | 83.71 | 83.24 |
| Zm00001d048511_P008 | Maize | cytosol | 83.24 | 83.0 |
| GSMUA_Achr1P01770_001 | Banana | cytosol | 75.52 | 78.24 |
| VIT_06s0061g01170.t01 | Wine grape | cytosol | 72.69 | 76.06 |
| Solyc06g074650.2.1 | Tomato | plastid | 71.0 | 74.14 |
| Bra037603.1-P | Field mustard | cytosol | 69.21 | 72.49 |
| AT5G22770.1 | Thale cress | cytosol | 68.93 | 72.33 |
| AT5G22780.1 | Thale cress | cytosol | 68.93 | 72.26 |
| Bra002427.1-P | Field mustard | cytosol | 68.46 | 72.19 |
| CDX92339 | Canola | cytosol | 68.46 | 72.19 |
| CDY26951 | Canola | cytosol | 68.46 | 72.12 |
| CDY29719 | Canola | cytosol | 62.81 | 67.99 |
| GSMUA_Achr5P15250_001 | Banana | cytosol | 61.96 | 66.26 |
| CDY20344 | Canola | cytosol | 37.76 | 62.17 |
| KRH25154 | Soybean | cytosol | 22.88 | 59.71 |
| Os03t0112400-01 | Rice | cytosol | 8.57 | 59.48 |
| Solyc11g066770.1.1 | Tomato | cytosol | 22.88 | 55.99 |
| HORVU5Hr1G019420.1 | Barley | cytosol | 2.92 | 36.47 |
| HORVU3Hr1G053020.1 | Barley | cytosol | 2.82 | 35.29 |
| HORVU1Hr1G048590.1 | Barley | cytosol, mitochondrion | 2.82 | 35.29 |
| HORVU7Hr1G050510.16 | Barley | cytosol | 4.8 | 31.1 |
| HORVU3Hr1G040310.1 | Barley | cytosol | 4.52 | 26.82 |
| HORVU7Hr1G027050.3 | Barley | cytosol | 19.68 | 24.05 |
| HORVU6Hr1G087920.7 | Barley | mitochondrion | 19.96 | 21.14 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 16.29 | 17.96 |
| HORVU1Hr1G054180.2 | Barley | cytosol, plastid | 12.62 | 14.13 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | MapMan:22.1.3.1 | Gene3D:3.30.310.10 | UniProt:A0A287Q396 | InterPro:AP2_complex_asu |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a-adaptin_app_sub_C | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf |
| InterPro:Coatomer/calthrin_app_sub_C | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006897 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 |
| GO:GO:0030131 | GO:GO:0035615 | GO:GO:0072583 | EnsemblPlantsGene:HORVU4Hr1G089310 | EnsemblPlants:HORVU4Hr1G089310.1 | InterPro:IPR011989 |
| InterPro:IPR012295 | PFAM:PF01602 | PFAM:PF02296 | PFAM:PF02883 | PIRSF:PIRSF037091 | PANTHER:PTHR22780 |
| PANTHER:PTHR22780:SF4 | SMART:SM00809 | SUPFAM:SSF48371 | SUPFAM:SSF49348 | SUPFAM:SSF55711 | InterPro:TBP_dom_sf |
| UniParc:UPI000B4879DE | SEG:seg | : | : | : | : |
Description
AP-2 complex subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287Q396]
Coordinates
chrchr4H:+:642155791..642276564
Molecular Weight (calculated)
118459.0 Da
IEP (calculated)
6.139
GRAVY (calculated)
-0.120
Length
1062 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALSGMRGLS VFISDIRNCH NKEQERLRVD KELGNIRTRF KNEKGLSHYE KKKYVWKMLY IHMLGYDVDF GHMETVSLIS APKYPEKQVG YIVTSCLLNE
0101: NNDFLRMVIN TVRNDIIGRN ETYQCLALTM VGNIGGKEFS ESLAPDVQKL LISSSCRPVV RKKAALCLLR LYRKNPDVVN IDGWSDRMAQ LLDERDLGVL
0201: TSVMSLFVSL VSNNAEAYWN CLPKCVRILE RMARNQDIPQ EYTYYGIPSP WLQVKAMRAL QYFPTIEDPS ARRALFEVLQ RILMGTDVVK NVNKNNASHA
0301: VLFEALALVM HLDAEKEMMS QCVALLGKFI AVREPNIRYL GLENMSRMLL VTDVQDIIKR HQAQIITSLK DPDISIRRRA LDLLYGMCDV TNAKEIVEEL
0401: LQYLNTAEFA MREELALKAA ILAEKFAPNL SWYVDVILQL IDKAGDFVSD DIWYRVVQFV TNNEDLQAYA AAKAREYLDK PALHETMVKV SAYLLGEYGH
0501: LLAQRPGCSP KELFTIINDR LPTVSSSTVA IIISAYAKIL MHTQPPDAGL QQQILTIFKK YQFTRSALMT CHLLYVCEVF FTLTLHFRHE SYIDVEIQQR
0601: AVEYFELSRK GPALADVLAE MPKFPERESA LLKKAEDAEV DTAEQSAIKL RSQQQSSSAL VVAAQPPVNG PAPAANHLTL VKMPSQNIAD ESNVSHDSHE
0701: ETAVEAPKEN GAPVEVQRNV EIIPETAPVS KVEPPASHPA SQADLLADLL GPLAIEGPPA AVEQIPAQGL EANQSPVGDL ALATLEDQSN SVQPIVNVEE
0801: KFNVLCTKDS GVLYEDPNIQ IGLKAEWRAH HGRLILFLGN KNTSPLMSLR ALILPPSHFK VELSSVPDTI PPRAQVQIPV EVTNLRASRD VAVLDFSYKH
0901: GATLVNAKLR LPIVLHKFLQ PITLSPEDFF AHWKTWNVQS LKVQEVVRGV KPLPIPEMAS LLLSLHLAVT PGLDTNPNNM VACATFFSET TNAALCLVRV
1001: ETDPQDRTQL RLTVASGDQN LTFEVEGVHQ GTFDRHPEGS SDLPSCTATS AGGSSSNSPR DI
0101: NNDFLRMVIN TVRNDIIGRN ETYQCLALTM VGNIGGKEFS ESLAPDVQKL LISSSCRPVV RKKAALCLLR LYRKNPDVVN IDGWSDRMAQ LLDERDLGVL
0201: TSVMSLFVSL VSNNAEAYWN CLPKCVRILE RMARNQDIPQ EYTYYGIPSP WLQVKAMRAL QYFPTIEDPS ARRALFEVLQ RILMGTDVVK NVNKNNASHA
0301: VLFEALALVM HLDAEKEMMS QCVALLGKFI AVREPNIRYL GLENMSRMLL VTDVQDIIKR HQAQIITSLK DPDISIRRRA LDLLYGMCDV TNAKEIVEEL
0401: LQYLNTAEFA MREELALKAA ILAEKFAPNL SWYVDVILQL IDKAGDFVSD DIWYRVVQFV TNNEDLQAYA AAKAREYLDK PALHETMVKV SAYLLGEYGH
0501: LLAQRPGCSP KELFTIINDR LPTVSSSTVA IIISAYAKIL MHTQPPDAGL QQQILTIFKK YQFTRSALMT CHLLYVCEVF FTLTLHFRHE SYIDVEIQQR
0601: AVEYFELSRK GPALADVLAE MPKFPERESA LLKKAEDAEV DTAEQSAIKL RSQQQSSSAL VVAAQPPVNG PAPAANHLTL VKMPSQNIAD ESNVSHDSHE
0701: ETAVEAPKEN GAPVEVQRNV EIIPETAPVS KVEPPASHPA SQADLLADLL GPLAIEGPPA AVEQIPAQGL EANQSPVGDL ALATLEDQSN SVQPIVNVEE
0801: KFNVLCTKDS GVLYEDPNIQ IGLKAEWRAH HGRLILFLGN KNTSPLMSLR ALILPPSHFK VELSSVPDTI PPRAQVQIPV EVTNLRASRD VAVLDFSYKH
0901: GATLVNAKLR LPIVLHKFLQ PITLSPEDFF AHWKTWNVQS LKVQEVVRGV KPLPIPEMAS LLLSLHLAVT PGLDTNPNNM VACATFFSET TNAALCLVRV
1001: ETDPQDRTQL RLTVASGDQN LTFEVEGVHQ GTFDRHPEGS SDLPSCTATS AGGSSSNSPR DI
0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYLDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TISTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAMV LADQQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSN
0701: EQHGPVGAEG VPDEVDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGA NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSESTG AILCLARIET DPADRTQLRM TVGTGDPTLT FELKEFIKEQ LITVPMGSRA LVPAAGPAPP VAQPPSPAAL
1001: ADDPGAMLAG LL
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYLDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TISTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAMV LADQQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSN
0701: EQHGPVGAEG VPDEVDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGA NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSESTG AILCLARIET DPADRTQLRM TVGTGDPTLT FELKEFIKEQ LITVPMGSRA LVPAAGPAPP VAQPPSPAAL
1001: ADDPGAMLAG LL
Arabidopsis Description
ALPHA-ADRAP-2 complex subunit alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.