Factsheet for HORVU7Hr1G027050.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G128900.2	Wheat	cytosol	97.81	97.7
TraesCS7A01G129800.3	Wheat	peroxisome	97.7	97.59
TraesCS7B01G029800.2	Wheat	cytosol	97.7	97.59
Os06t0167100-01	Rice	plasma membrane	89.07	88.97
KXG19397	Sorghum	cytosol, plastid	88.38	87.87
Zm00001d045195_P002	Maize	cytosol	86.77	86.97
Zm00001d036305_P003	Maize	mitochondrion	88.03	84.44
HORVU5Hr1G019420.1	Barley	cytosol	8.17	83.53
GSMUA_Achr10P...	Banana	mitochondrion	32.11	82.79
HORVU3Hr1G053020.1	Barley	cytosol	8.06	82.35
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	7.94	81.18
CDX91727	Canola	mitochondrion	10.82	78.33
GSMUA_Achr9P18340_001	Banana	mitochondrion	75.95	76.48
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	74.57	75.09
HORVU3Hr1G040310.1	Barley	cytosol	14.96	72.63
VIT_01s0026g00310.t01	Wine grape	mitochondrion	73.07	72.32
HORVU6Hr1G087920.7	Barley	mitochondrion	81.93	70.99
KRH74623	Soybean	mitochondrion	70.31	70.15
KRH69527	Soybean	mitochondrion	70.43	70.1
Solyc04g025870.2.1	Tomato	plastid	69.28	68.64
CDY59088	Canola	mitochondrion	68.7	68.46
Bra024627.1-P	Field mustard	mitochondrion	68.58	68.35
Solyc05g005780.2.1	Tomato	nucleus	69.04	68.26
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	69.04	68.26
CDY47649	Canola	mitochondrion	68.47	68.23
AT1G23900.2	Thale cress	mitochondrion	68.7	68.15
CDY28466	Canola	mitochondrion	68.35	67.96
CDY25807	Canola	mitochondrion	68.24	67.77
Bra012393.1-P	Field mustard	mitochondrion	67.89	67.51
KRH45711	Soybean	cytosol, mitochondrion	68.01	67.08
AT1G60070.2	Thale cress	cytosol, mitochondrion	68.58	66.37
HORVU7Hr1G050510.16	Barley	cytosol	12.43	65.85
CDY24514	Canola	cytosol	14.96	64.36
CDY33619	Canola	mitochondrion	31.76	60.66
GSMUA_Achr10P...	Banana	cytosol	24.4	57.77
Bra031528.1-P	Field mustard	mitochondrion	12.89	51.38
KRG99303	Soybean	nucleus	8.06	38.89
HORVU4Hr1G089310.1	Barley	cytosol	24.05	19.68
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	19.79	17.86
HORVU1Hr1G054180.2	Barley	cytosol, plastid	16.34	14.98

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.2.1	InterPro:AP1_complex_gsu	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:GAE_dom	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	GO:GO:0016020
GO:GO:0016192	GO:GO:0030117	GO:GO:0030121	GO:GO:0030131	GO:GO:0031410	EnsemblPlantsGene:HORVU7Hr1G027050
EnsemblPlants:HORVU7Hr1G027050.3	InterPro:IPR008153	InterPro:IPR011989	UniProt:M0Y1U7	PFAM:PF01602	PFAM:PF02883
PIRSF:PIRSF037094	PFscan:PS50180	PANTHER:PTHR22780	PANTHER:PTHR22780:SF27	SMART:SM00809	SUPFAM:SSF48371
SUPFAM:SSF49348	UniParc:UPI000393946C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:47721977..47730930

Molecular Weight (calculated)

95123.8 Da

IEP (calculated)

6.997

GRAVY (calculated)

-0.064

Length

869 amino acids

Sequence
(BLAST)

001: MDLSLNPFSS GTRLRDMIRA IRASKTAAEE RAVVRRECAA IRAAISENDQ DYRHRNMAKL MFIHMLGYPT HFGQMECLKL IASSGFPEKR IGYLGLTLLL
101: DERQEVLMLV TNSLKQDLNH SNQFIVGLAL CALGNICSAE MARDLAPEVE RLLQTRDPNT KKKAALCSIR IVRKVPDLAE NFMGSAASLL KEKHHGVLIS
201: VVQLCTELCK SSREALEYLR KHSVEGLVRI LRDVSNSSYA PEYDIAGITD PFLHIRVLRL MRTLGQGDAD CSEYVNDILA QVATKTESNK NAGNAILYEC
301: VETIMGIEAT SGLRVLAINI LGRFLSNRDN NIRYVALNML MKAMAVDTLA VQRHRVTILE CVKDADVSIR KRALELVYLL VNDTNVKPLT KELIDYLEVS
401: DDDFKEDLTA KICSIVEKFS QDKLWYLDQM FKVLTLTGNF VKDDVWHALI VLISNASELQ GYSVRSLYKA LQACGTQESL VRVAVWCIGE YGEMLVNNIS
501: MLDVEEPITV TESDAVDALE LALKRYSVDV TTRAMCLVAL LKLSSRFPST SKRIQVIVVQ NKGNTVLELQ QRSIEFNSII QRHQSIKSSL LERMPVLDEA
601: SYLEKRAASS QATVSLTKPT PSAASGGSLK VPNGAVKPPP APLADLLDLS SDDAPVTTSA PSTAPNDFLQ DLLGIGLTDT STAGGAPSAS TDILMDLLSI
701: GSYPVQNGPP ATSNISSPGQ VTKHAPGTPQ VIDLLDGLSP STPLPDVNAA YPSITAFQSA TLKVTFNFKK QPGKPQETTM HASFTNLTSA TLTNFMFQAA
801: VPKFIQLRLD PASSSTLPAS GNGSITQSLS VTNNQHGQKP LAMRIRISYK VNGEDRLEQG QISNFPAGL

Best Arabidopsis Sequence Match ( AT1G60070.1 )
(BLAST)

001: MNPFSSGTRL SDMIRAIRAS KTAAEERAVV RKECAAIRAS INENDQDYRH RDLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHTNQY IVGLALCALG NICSAEMARD LAPEVERLLQ FRDPNIRKKA ALCAIRIIRK VPDLSENFIN PGAALLKEKH HGVLITGVHL
201: CTEICKVSSE ALEYFRKKCT EGLVKTLRDI ANSPYSPEYD VAGITDPFLH IRLLKLLRVL GQGDADASDC MNDILAQVAS KTESNKNAGN AILYECVQTI
301: MSIEENGGLR VLAINILGKF LSNRDNNIRY VALNMLMRSL TVDSQAVQRH RATILECVKD SDASIQKRAL ELIYLLVNEN NVKPLAKELI EYLEVSEQDF
401: KGDLTAKICS IVEKFAPEKI WYIDQMLKVL SEAGTYVKED VWHALIVVIT NAPDLHGYTV RALYRALHTS FEQETLVRVA IWCIGEYADL LVNNAGMLDL
501: EDPITVTESD AVDVVENAIK HHLSDVTTKA MALIALLKIS SRFPSCSERV KSIIGQNKGS FVLELQQRSL EFSSVIQKHQ NIRSSLVERM PVLDEATFSG
601: RRAGSLPASV STSGKSPLGI PNGVAKAAAP LVDLLDLGSD DTPAPTSSSN NFLQDLLGVD LSQPSAQPGA MQPSQAGADI LMDLLSIGTP APVQNGSANG
701: DLLSIQDNNA PIAPSLTSPT APSSMMDLLD GFGPTPPKSE DKSAAYPSIV AFESSSLKIE FNFTKQSENP QTTDIVANFI NLTPNVYTEF LFQAAVPKFL
801: QLHLDPASSN SLPANGNIKQ TMRVTNSQKG KKPIVMRMRV GYKINGKDVL EEGQINNFPR GL

Arabidopsis Description

Adaptor protein complex AP-1, gamma subunit [Source:UniProtKB/TrEMBL;Acc:F4IEP9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.