Factsheet for HORVU3Hr1G040310.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G019420.1	Barley	cytosol	41.34	87.06
HORVU3Hr1G053020.1	Barley	cytosol	40.22	84.71
HORVU1Hr1G048590.1	Barley	cytosol, mitochondrion	39.66	83.53
HORVU7Hr1G050510.16	Barley	cytosol	45.81	50.0
CDY24514	Canola	cytosol	35.2	31.19
Bra031528.1-P	Field mustard	mitochondrion	34.64	28.44
Os02t0805000-01	Rice	cytosol, plasma membrane	77.65	28.43
CDY33619	Canola	mitochondrion	53.07	20.88
HORVU7Hr1G027050.3	Barley	cytosol	72.63	14.96
KXG31353	Sorghum	cytosol	73.74	14.65
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	70.39	14.6
HORVU6Hr1G087920.7	Barley	mitochondrion	81.01	14.46
Zm00001d051998_P003	Maize	cytosol	72.07	14.32
GSMUA_Achr9P18340_001	Banana	mitochondrion	67.6	14.02
GSMUA_Achr10P...	Banana	mitochondrion	25.7	13.65
Bra024627.1-P	Field mustard	mitochondrion	64.8	13.3
CDY59088	Canola	mitochondrion	64.8	13.3
Bra012393.1-P	Field mustard	mitochondrion	64.8	13.27
CDY25807	Canola	mitochondrion	64.8	13.26
CDY47649	Canola	mitochondrion	64.25	13.19
VIT_01s0026g00310.t01	Wine grape	mitochondrion	64.25	13.1
CDY28466	Canola	mitochondrion	63.69	13.04
AT1G23900.2	Thale cress	mitochondrion	63.69	13.01
Solyc04g025870.2.1	Tomato	plastid	62.57	12.77
AT1G60070.2	Thale cress	cytosol, mitochondrion	63.69	12.69
KRH45711	Soybean	cytosol, mitochondrion	61.45	12.49
KRH69527	Soybean	mitochondrion	60.89	12.49
PGSC0003DMT400010532	Potato	cytosol, mitochondrion	60.34	12.29
KRH74623	Soybean	mitochondrion	59.78	12.28
Solyc05g005780.2.1	Tomato	nucleus	59.78	12.17
HORVU4Hr1G089310.1	Barley	cytosol	26.82	4.52
HORVU3Hr1G093320.4	Barley	cytosol, mitochondrion, nucleus	23.46	4.36
HORVU1Hr1G054180.2	Barley	cytosol, plastid	17.88	3.38
CDX91727	Canola	mitochondrion	1.12	1.67
KRG99303	Soybean	nucleus	1.12	1.11
GSMUA_Achr10P...	Banana	cytosol	0.56	0.27

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A287KUP1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	EnsemblPlantsGene:HORVU3Hr1G040310	EnsemblPlants:HORVU3Hr1G040310.1	InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22780
PANTHER:PTHR22780:SF27	SUPFAM:SSF48371	UniParc:UPI000B46972E	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:242518959..242524527

Molecular Weight (calculated)

20689.2 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.136

Length

179 amino acids

Sequence
(BLAST)

001: MEDRPLRNCI EGMVRIHRDV SNSSYAPEYD VAGILDPFLH IRVLKLMHIL GQGDADCSDY MNDILAQICC SEHTYDGIIV DTQAVQRHRV SILECVKDAD
101: APIRKRALEL VYLLVNDTNV KLLTKKLVDY LKVANPDFKE DLRAKICSMA EKFSQEKLWY LDQMFKVLSL SWHMLKETL

Best Arabidopsis Sequence Match ( AT1G23900.1 )
(BLAST)

001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL

Arabidopsis Description

GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.