Factsheet for Bra022309.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92225	Canola	cytosol, nucleus, plastid	98.48	98.48
Bra032266.1-P	Field mustard	nucleus	72.31	72.82
VIT_17s0000g03430.t01	Wine grape	cytosol	57.94	51.72
KRH41691	Soybean	cytosol	55.26	51.64
KRH60392	Soybean	cytosol	57.71	50.56
PGSC0003DMT400014395	Potato	cytosol	55.14	48.66
Solyc03g119270.1.1	Tomato	nucleus	55.02	48.56
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	35.4	42.44
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	38.2	41.03
EER88616	Sorghum	cytosol	23.83	40.0
EES14423	Sorghum	cytosol	12.73	39.78
EES17171	Sorghum	plastid	41.24	37.24
TraesCS1A01G211900.1	Wheat	plastid	40.07	37.2
TraesCS1D01G215000.1	Wheat	cytosol, plastid	39.95	37.05
TraesCS1B01G225600.1	Wheat	plastid	39.84	36.94
Zm00001d023820_P001	Maize	mitochondrion	39.95	36.93
Os01t0512200-01	Rice	plasma membrane	40.65	36.83
Zm00001d041626_P001	Maize	plastid	40.19	36.56
HORVU1Hr1G054180.2	Barley	cytosol, plastid	40.19	36.29
KXG20021	Sorghum	cytosol	29.67	36.29
Bra024739.1-P	Field mustard	cytosol	6.07	19.77
Bra012393.1-P	Field mustard	mitochondrion	16.59	16.25
Bra024627.1-P	Field mustard	mitochondrion	16.47	16.17
Bra023199.1-P	Field mustard	cytosol	16.59	15.14
Bra002427.1-P	Field mustard	cytosol	16.71	14.2
Bra037603.1-P	Field mustard	cytosol	16.71	14.1
Bra031528.1-P	Field mustard	mitochondrion	3.5	13.76

Protein Annotations

MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra022309	EnsemblPlants:Bra022309.1	EnsemblPlants:Bra022309.1-P
InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030123	UniProt:M4E0L2	PFAM:PF01602
PIRSF:PIRSF037092	PANTHER:PTHR22781	SUPFAM:SSF48371	UniParc:UPI0002548169	SEG:seg	:

Description

AT1G48760 (E=0.0) delta-ADR | delta-ADR (delta-adaptin); binding / clathrin binding / protein binding / protein transporter

Coordinates

chrA05:+:18502806..18505376

Molecular Weight (calculated)

95548.6 Da

IEP (calculated)

6.318

GRAVY (calculated)

-0.269

Length

856 amino acids

Sequence
(BLAST)

001: MASSNSLMDS LFQRSLEDLI KGLRLGESTF ISRSLEEIRR EIKLTDLSTK SVALQKLSYL AALHGVDMAW AAFHAVEVVS SSRFAHKRIG YHAIAQSFSD
101: QTPVMLLITN QLRKDLNSSN EHEVSLALEC LARIGTDDLA RDLTSEVFTL LGSSKALVRK KAIGVVLRVF DKYPDAVKVC FKRLVENLES SDPQLLSAVV
201: GVFCELTAKD PRSYLPLAPE FYKILVDSRN NWVLIKVLKI FAKLASIEPR LAKKVADPVC EHMRKQNVGK SLLFECIRTV FSSLSDQETA LKLAVAKIRE
301: FLVDDDPNLK YLGLHALSIV APKHLWAVLE NKEAVVKAMS DEDPNVKLEA LHLLMAMVNE DNVTEISRIL MNYALKSDPL FCNEIICSVL LPCSRNSYEI
401: IVDFDWYLSL LGEMARVPHC QRGKEIEHQL IDIGTRVKDA RLELVRVSRA LLIDPALLGN QFLYPILSAA AWASGEYVEF SKSPYEIAEA LLQPRTCLLP
501: DSIRAIYIHS AFKVLVFSLG AYFSAQQPTS PPLAQESTSS GHSMVNGFTY NSISSLVNMI ELGLCSLSGT IDVEVQERAK NILGFIGMIK HEIAEKATSQ
601: NSETEGHRAI AFMEDVFSEE LGPVSSTAQE KVPLPEGLEL NENLEGLQEI CREVLEPMAE SDYSSDKVSF SVAKLRIRDQ EEASSSLPPP LESSSLLAEH
701: RKRHGLYYLS SQKSEDHNDR EGNDNNTSNE YPPANEISVD SFKPKKKISK PRPVVVKLDE GDEPKRKPDA SSSNDESLSR AIQTALMGKG KGKEKEKEIV
801: KENHEMNVDT ENIEQSSRRE KKNKKNGERS SKRSSRRQRG KEASVTKPVE VPDLLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.