Factsheet for GSMUA_Achr4P13750_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	71.27	79.55
EES14423	Sorghum	cytosol	17.31	50.37
EER88616	Sorghum	cytosol	31.12	48.63
EES17171	Sorghum	plastid	53.7	45.15
Zm00001d023820_P001	Maize	mitochondrion	52.32	45.03
Os01t0512200-01	Rice	plasma membrane	52.32	44.13
TraesCS1A01G211900.1	Wheat	plastid	50.94	44.03
Zm00001d041626_P001	Maize	plastid	51.94	44.0
TraesCS1D01G215000.1	Wheat	cytosol, plastid	50.69	43.77
TraesCS1B01G225600.1	Wheat	plastid	50.69	43.77
HORVU1Hr1G054180.2	Barley	cytosol, plastid	51.82	43.57
VIT_17s0000g03430.t01	Wine grape	cytosol	49.94	41.5
Solyc03g119270.1.1	Tomato	nucleus	49.81	40.93
PGSC0003DMT400014395	Potato	cytosol	49.69	40.82
CDY04318	Canola	cytosol, nucleus, plastid	39.27	38.98
Bra022309.1-P	Field mustard	nucleus	41.03	38.2
CDX92225	Canola	cytosol, nucleus, plastid	40.9	38.08
CDY68338	Canola	nucleus	40.4	37.88
Bra032266.1-P	Field mustard	nucleus	40.28	37.76
KRH41691	Soybean	cytosol	43.29	37.66
AT1G48760.2	Thale cress	cytosol	41.03	37.63
KXG20021	Sorghum	cytosol	33.0	37.57
CDY24454	Canola	cytosol	40.15	37.47
KRH60392	Soybean	cytosol	45.92	37.46
GSMUA_Achr5P15260_001	Banana	cytosol	2.63	16.03
GSMUA_Achr9P18340_001	Banana	mitochondrion	14.43	13.33
GSMUA_Achr8P08830_001	Banana	cytosol	13.55	13.11
GSMUA_Achr3P10470_001	Banana	cytosol, mitochondrion	14.18	13.09
GSMUA_Achr10P...	Banana	mitochondrion	5.52	13.06
GSMUA_Achr11P...	Banana	cytosol	14.68	12.57
GSMUA_Achr1P01770_001	Banana	cytosol	14.05	10.93
GSMUA_Achr10P...	Banana	cytosol	4.77	10.35
GSMUA_Achr5P15250_001	Banana	cytosol	11.67	9.37

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	EnsemblPlantsGene:GSMUA_Achr4G13750_001	EnsemblPlants:GSMUA_Achr4P13750_001	EnsemblPlants:GSMUA_Achr4T13750_001	InterPro:IPR011989
UniProt:M0SNP0	PFAM:PF01602	PANTHER:PTHR22781	SUPFAM:SSF48371	UniParc:UPI00029508DF	SEG:seg

Description

Putative AP-3 complex subunit delta [Source:GMGC_GENE;Acc:GSMUA_Achr4G13750_001]

Coordinates

chr4:-:10287430..10290246

Molecular Weight (calculated)

89099.8 Da

IEP (calculated)

5.745

GRAVY (calculated)

-0.297

Length

797 amino acids

Sequence
(BLAST)

001: MAATSSAPSL VDTLFQRSLD DLIRSLRSSS SSSVLEAAAI TRALDEIRRE IRSPDLDTKA VALQKLTYLA SLHHLDMSWA AFHALELLPS PSLPHPRVAY
101: LAASLSFHPS STDLLPLATH QLRKHLAPSP ANTPALIFAR LAPLERRLAV RILDPVCQLL RRSPAKSVVF ECIRTVLSSL SDHDSAVRLA VDKIKEFLAS
201: DDDPNLRREV VIRSLNDTDT NIRHQALCLI MGMLRESNVV EICNLLIKYA MKSDPDFANE ILDAVLATCG RNVYELIVDF DWYVSLLGEM ARNPHCAKGD
301: EIERQLVDIG LRVRDARPEL VRVARDLLID PALLGNPFLC RVLSAAAWVS GEYVESSRNL LELVEALLQP RTNLLSLLVR AVYIQAVFKV VTFSFIFFIK
401: QIQAFDTKSS ADRNAAFENE NDVATADKAV IFDSIDNNET FKHESLSHLL DFVETTVGPL SECDNVEIQE RARNVLGLIH IIRETQYWDI VAEHELTRDK
501: KISEIVELME AAFSEELGPV STNAQKRVTV PEDLILNENL SDLAEVLGDI DVTPCTSISF SLRCHHPTET KEDSAPVIEA SSLLAEHRKR HGLYYLPTEK
601: DEVESNDYPL ANEPLLAVSH VDDAKDIVKL TAQSFIPRKE KPMKPRPVVI RLDEGDGDSS SGLTMVKEFK DDLLSGAIRN VLLGNESKPS SSCDMSSDRT
701: SRRGETDASN NNELFSQPKE SNALDGREHR KSSSRKSRHH TRHKEKNGSL GNEDIEETSH RHSTRSSRHQ GRHKHRERGD APPDVVSQEP VIQDFLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.