Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES01338 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G23460.1 | EES01338 | AT1G60780.1 | 23543752 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029196_P002 | Maize | cytosol | 93.98 | 98.83 |
| Zm00001d047464_P024 | Maize | cytosol, mitochondrion, plastid | 98.77 | 98.66 |
| Os03t0355600-01 | Rice | plasma membrane | 94.87 | 95.3 |
| TraesCS4D01G166700.1 | Wheat | cytosol | 93.42 | 93.32 |
| TraesCS4B01G165000.1 | Wheat | cytosol, golgi | 93.42 | 93.32 |
| HORVU4Hr1G045980.10 | Barley | cytosol | 93.09 | 92.88 |
| TraesCS4A01G166200.2 | Wheat | cytosol | 93.09 | 92.67 |
| GSMUA_Achr1P24200_001 | Banana | cytosol | 87.18 | 86.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 86.84 | 86.36 |
| KRH77672 | Soybean | endoplasmic reticulum | 85.17 | 85.75 |
| KRH27813 | Soybean | endoplasmic reticulum, nucleus | 84.84 | 84.74 |
| PGSC0003DMT400031784 | Potato | cytosol | 84.28 | 84.66 |
| Bra019302.1-P | Field mustard | cytosol | 82.72 | 84.32 |
| Solyc08g081320.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 84.06 | 84.15 |
| AT4G23460.1 | Thale cress | cytosol | 83.61 | 83.99 |
| KRH24097 | Soybean | endoplasmic reticulum | 83.39 | 83.3 |
| Bra035228.1-P | Field mustard | cytosol | 83.28 | 83.09 |
| KRH29071 | Soybean | cytosol, endoplasmic reticulum | 76.37 | 83.03 |
| VIT_02s0025g00100.t01 | Wine grape | cytosol | 84.5 | 82.39 |
| AT4G11380.2 | Thale cress | cytosol | 83.72 | 81.99 |
| CDY71479 | Canola | cytosol | 35.23 | 73.32 |
| EES01104 | Sorghum | plastid | 25.64 | 27.22 |
| EES13267 | Sorghum | cytosol | 24.3 | 19.8 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1150 | MapMan:22.1.2.2 | MapMan:22.1.3.2 | Gene3D:3.30.310.10 | InterPro:AP_beta |
| InterPro:AP_complex_bsu_1_2_4 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:B-adaptin_app_sub_C | UniProt:C5WZP4 | InterPro:Clathrin/coatomer_adapt-like_N |
| InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf | InterPro:Clathrin_b-adaptin_app_Ig-like | InterPro:Coatomer/calthrin_app_sub_C | EnsemblPlants:EER94839 | ProteinID:EER94839 |
| ProteinID:EER94839.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030131 |
| GO:GO:0030276 | InterPro:IPR011989 | InterPro:IPR012295 | InterPro:IPR013037 | PFAM:PF01602 | PFAM:PF02883 |
| PFAM:PF09066 | PIRSF:PIRSF002291 | PANTHER:PTHR11134 | PANTHER:PTHR11134:SF3 | SMART:SM00809 | SMART:SM01020 |
| EnsemblPlantsGene:SORBI_3001G369000 | SUPFAM:SSF48371 | SUPFAM:SSF49348 | SUPFAM:SSF55711 | InterPro:TBP_dom_sf | UniParc:UPI00081AB4FA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:65750487..65757894
Molecular Weight (calculated)
99351.8 Da
IEP (calculated)
4.691
GRAVY (calculated)
-0.082
Length
897 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGHDSKYFS TTKKGEIPEL KEELNSQYKD KRKDAVKKVI AAMTVGKDVS SLFTDVVNCM QTENLELKKL VYLYLINYAK SQPDLAILAV NTFVKDSQDP
101: NPLIRALAVR TMGCIRVDKI TEYLCDPLQR CLKDDDPYVR KTAAICVAKL YDINAELVED RGFLEALKDL ISDNNPMVVA NAVAALAEIQ DSSVRPIFEI
201: TSHTLSKLLT ALNECTEWGQ VFILDSLSRY KAADAREAEN IVERVTPRLQ HANCAVVLSA VKIILLQMEL ITSTDVVRNL CKKMAPPLVT LLSAEPEIQY
301: VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK
401: IKVNYVVQEA IIVIKDIFRR YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ETFPEEPALV QLQLLTATVK LFLKKPTEGP
501: QQMIQAVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD VVLAEKPVIS DDSNQLDSSL LDELLANIST LSSVYHKPPE SFVSRVKAAP RADDEEFADT
601: AETGYSESPS QGVDGASPSS SAGTSSNVPV KQPAAGSPPP AAMPDLLGDL MGMDNAIVPV DEPAAPSGPP LPVLLPSTTG QGLQISAQLT RRDGQIYYDI
701: SFENGTQGVL DGFMIQFNKN TFGLAAGEAL QVTPLQPGQS TRTLLQMTPF QNISPGAPNS LLQVAVKNNQ QPVWYFNDKI PLHVFFGEDG KMERAGFLEA
801: WKSLPDDNEF TKEFPGSIIS SIDATVERLA ASNVFFIAKR KNANMDVLYL SAKMPRGIPF LIEVTASVGV PGVKCAVKTP NREMVPLFFE AMEALTK
101: NPLIRALAVR TMGCIRVDKI TEYLCDPLQR CLKDDDPYVR KTAAICVAKL YDINAELVED RGFLEALKDL ISDNNPMVVA NAVAALAEIQ DSSVRPIFEI
201: TSHTLSKLLT ALNECTEWGQ VFILDSLSRY KAADAREAEN IVERVTPRLQ HANCAVVLSA VKIILLQMEL ITSTDVVRNL CKKMAPPLVT LLSAEPEIQY
301: VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK
401: IKVNYVVQEA IIVIKDIFRR YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ETFPEEPALV QLQLLTATVK LFLKKPTEGP
501: QQMIQAVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD VVLAEKPVIS DDSNQLDSSL LDELLANIST LSSVYHKPPE SFVSRVKAAP RADDEEFADT
601: AETGYSESPS QGVDGASPSS SAGTSSNVPV KQPAAGSPPP AAMPDLLGDL MGMDNAIVPV DEPAAPSGPP LPVLLPSTTG QGLQISAQLT RRDGQIYYDI
701: SFENGTQGVL DGFMIQFNKN TFGLAAGEAL QVTPLQPGQS TRTLLQMTPF QNISPGAPNS LLQVAVKNNQ QPVWYFNDKI PLHVFFGEDG KMERAGFLEA
801: WKSLPDDNEF TKEFPGSIIS SIDATVERLA ASNVFFIAKR KNANMDVLYL SAKMPRGIPF LIEVTASVGV PGVKCAVKTP NREMVPLFFE AMEALTK
001: MSGHDSKYFS TTKKGEIPEL KEELNSQYKD KRKDAVKKVI AAMTVGKDVS SLFTDVVNCM QTENLELKKL VYLYLINYAK SQPDLAILAV NTFVKDSQDP
101: NPLIRALAVR TMGCIRVDKI TEYLCDPLQK CLKDDDPYVR KTAAICVAKL FDINAELVED RGFLEALKDL ISDNNPMVVA NAVAALAEIQ ENSTSPIFEI
201: NSTILTKLLT ALNECTEWGQ VFILDALSRY KASDPREAEN IVERVTPRLQ HANCAVVLSA VKMILQQMEL ITSTDVIRNL CKKMAPPLVT LLSAEPEIQY
301: VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK
401: IKVNYVVQEA IIVIKDIFRR YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ENFPEEPAQV QLQLLTATVK LFLKKPTEGP
501: QQMIQVVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD VVLAEKPVIT DDSNQLDPSL LDELLANIST LSSVYHKPPE AFVTRLKTTV QKTEDEDYVE
601: GSETGYPEAS GNPVDGAASP SATTGYVTKL AAAPAPVPDL LGDLMGSDNA AIVPVDEPTT PSGRPLPVVL PASKGQGLQI SAQLTRQDGQ VFYSMLLENN
701: SQSLLDGFMI QFNKNSFGLA AVGSLQVPPL QPGASARTMM PMVLSQNMST GSTSSVLQVA VKNNQQPVWY FEDKIVLNAL FSEDGRMERG TFLETWKSLP
801: DSNEVQKEFP GITITSVEST LDLLAASNMF FIAKRKNGNQ DVLYLSAKVP RGIPFLIELT AIVGQPGLKC AVKTPTPEIA PLFFEAVEIL FKA
101: NPLIRALAVR TMGCIRVDKI TEYLCDPLQK CLKDDDPYVR KTAAICVAKL FDINAELVED RGFLEALKDL ISDNNPMVVA NAVAALAEIQ ENSTSPIFEI
201: NSTILTKLLT ALNECTEWGQ VFILDALSRY KASDPREAEN IVERVTPRLQ HANCAVVLSA VKMILQQMEL ITSTDVIRNL CKKMAPPLVT LLSAEPEIQY
301: VALRNINLIV QKRPTILAHE IKVFFCKYND PIYVKMEKLE IMIKLASDRN IDQVLLEFKE YATEVDVDFV RKAVRAIGRC AIKLERAAER CISVLLELIK
401: IKVNYVVQEA IIVIKDIFRR YPNTYESIIA TLCESLDTLD EPEAKASMIW IIGEYAERID NADELLESFL ENFPEEPAQV QLQLLTATVK LFLKKPTEGP
501: QQMIQVVLNN ATVETDNPDL RDRAYIYWRL LSTDPEAAKD VVLAEKPVIT DDSNQLDPSL LDELLANIST LSSVYHKPPE AFVTRLKTTV QKTEDEDYVE
601: GSETGYPEAS GNPVDGAASP SATTGYVTKL AAAPAPVPDL LGDLMGSDNA AIVPVDEPTT PSGRPLPVVL PASKGQGLQI SAQLTRQDGQ VFYSMLLENN
701: SQSLLDGFMI QFNKNSFGLA AVGSLQVPPL QPGASARTMM PMVLSQNMST GSTSSVLQVA VKNNQQPVWY FEDKIVLNAL FSEDGRMERG TFLETWKSLP
801: DSNEVQKEFP GITITSVEST LDLLAASNMF FIAKRKNGNQ DVLYLSAKVP RGIPFLIELT AIVGQPGLKC AVKTPTPEIA PLFFEAVEIL FKA
Arabidopsis Description
BETAC-ADBeta-adaptin-like protein C [Source:UniProtKB/Swiss-Prot;Acc:O81742]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.