CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035093_P002	Maize	plastid	92.28	88.97
TraesCS3B01G599600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	76.11	75.97
TraesCS3D01G535400.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	74.66	74.66
TraesCS3A01G530000.1	Wheat	cytosol	73.39	74.4
Os01t0973300-01	Rice	cytosol	61.04	72.49
HORVU3Hr1G115880.4	Barley	cytosol, plastid	76.02	71.05
TraesCS3B01G600100.1	Wheat	cytosol, golgi, mitochondrion, nucleus	39.06	67.82
TraesCS3B01G599800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	35.69	66.84
GSMUA_Achr10P...	Banana	cytosol	25.98	63.27
VIT_13s0019g01530.t01	Wine grape	cytosol	53.68	51.84
KRH73041	Soybean	cytosol, peroxisome, plastid	52.59	51.24
KRH15094	Soybean	cytosol, peroxisome, plastid	52.23	50.88
Solyc06g043030.2.1	Tomato	cytosol, peroxisome, plastid	52.5	50.79
CDY40224	Canola	cytosol, plasma membrane, plastid	49.59	50.0
Bra007167.1-P	Field mustard	cytosol	45.23	49.8
CDY41227	Canola	cytosol	49.41	49.77
AT3G55480.2	Thale cress	cytosol, plasma membrane, plastid	48.5	47.89
PGSC0003DMT400076344	Potato	cytosol	25.25	43.51
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	27.16	41.99
GSMUA_Achr7P15120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	26.88	41.57
EER94839	Sorghum	cytosol	19.8	24.3
EES01104	Sorghum	plastid	14.62	19.05

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.2	EntrezGene:8068578	InterPro:AP3B_C	InterPro:AP3_beta	InterPro:AP_beta
InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5YMD0	InterPro:Clathrin/coatomer_adapt-like_N	EnsemblPlants:EES13267	ProteinID:EES13267
ProteinID:EES13267.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0006896	GO:GO:0008150	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016043	GO:GO:0016192	GO:GO:0019725	GO:GO:0030117
GO:GO:0030123	GO:GO:0051453	GO:GO:0080171	InterPro:IPR011989	PFAM:PF01602	PFAM:PF14796
PIRSF:PIRSF037096	PANTHER:PTHR11134	PANTHER:PTHR11134:SF1	SMART:SM01355	EnsemblPlantsGene:SORBI_3007G019300	SUPFAM:SSF48371
unigene:Sbi.12703	UniParc:UPI0001A87779	RefSeq:XP_002443772.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:1815408..1821577

Molecular Weight (calculated)

121383.0 Da

IEP (calculated)

5.018

GRAVY (calculated)

0.002

Length

1101 amino acids

Sequence
(BLAST)

0001: MFGLQASGAA ASWVVGRMGT DAHLYDDPDD ASIPELLDSR FDADKVDALK RLLALIAQGV DVAHLFPQVV KNVASQSLEV KKLVYLYLLH YADKRQNEAL
0101: LSINIFQKDL SDINPLVRAW ALRTMAGIRL HVVAPLVLVA IKKCARDPSA YVRKCAAYAL CKLCDLLPDE STALEEIVDI LFNDNSPGVV GAAAVAFKSV
0201: CPSCLELVSK HFRRLCETLP DIEEWTQIVL IEILLRYVIA RHGLVKDSLL FASDLPTETQ GVTDSDAVAS VPIQPDSISN GVSDTISSIM LFRHYIEQCS
0301: GPSDREGNNL KFSSVTTNSN DDVAILLKCT SPLLWSRNSG VVLAAASVHW IMAPIGDVKR IVGPILFTLR SSPDAAYVML GNILVFAKTM PSLFAPFYED
0401: FFVNASDPYQ TRALKLEILT SIATEQSIPA IFEEFQDYIK DPDRKFVADT VAAIALCAQK LPSIATACLE GLLTLVFYES FISNSVHLDG ENAVLVQAIL
0501: SIKAIVKMDP VSHEKVIVRL VRCFDKIKDP AARSLIVWVF GEYSFMGDLT TKIVPPVLKY LAWSFSAEVV ETKLQILNSS AKVIMRCTEE HMEEFKRIVA
0601: YVIELATCDL NYDVRDRARL LSRLLPCYMT HQGPSHQPQN GDIYKELADH IFNGKLQPTS HSASNYRIYL PGSLSQVVLH AAPGYAPLPK PQSMELNHNV
0701: SEATRGKAKL SGSNNSGAES VTSAYESSSV YDSESEGADL SDRDTFESHQ DQEDNQDAPL VQIYDASIQQ GQTGQNTEEN LADLISTDLT ELMSKSALES
0801: WLDEAPPEPV VQNLTQTSSA RVSFTNLNFE RKPKLHTLLD SSGSNGLSAL YAFSSEVSPR SRLLVCVDLY FENVTTQQLT DITIEAEEAS SSVDSIDQTS
0901: EGSSGVPTIV PLEEIHSLAP QQMAKMVLQV HFHHHLLPLK LSVLCNGKRH PAKLHPDIAY FVRPLPMDLN TFLCKENQLR GMFEYARRCT FKDHLQKLEH
1001: EDSAEHSDKN LQVAQSVASK ILSNANVHLV SMDMPVTFSV DDASGLCWRF SSEILSTSKP CLITILAEGH ASGPLDLTVK VNSEDTVFAL NLLNRVVVII
1101: D

Best Arabidopsis Sequence Match ( AT3G55480.2 )
(BLAST)

0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT

Arabidopsis Description

PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.