Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 95.06 | 95.15 |
| Bra007167.1-P | Field mustard | cytosol | 83.99 | 91.8 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 87.37 | 85.65 |
| GSMUA_Achr10P... | Banana | cytosol | 26.07 | 63.05 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 62.4 | 59.82 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 61.67 | 59.65 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 61.39 | 59.38 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 59.65 | 57.29 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.86 | 49.41 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 49.77 | 49.41 |
| EES13267 | Sorghum | cytosol | 49.77 | 49.41 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 49.04 | 49.36 |
| PGSC0003DMT400076344 | Potato | cytosol | 27.36 | 46.79 |
| Zm00001d035093_P002 | Maize | plastid | 48.76 | 46.67 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 49.68 | 46.1 |
| Os01t0973300-01 | Rice | cytosol | 38.7 | 45.63 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 23.15 | 39.91 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 25.98 | 39.89 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 21.32 | 39.63 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 25.62 | 39.33 |
| CDX70642 | Canola | cytosol | 4.67 | 24.29 |
| CDX94190 | Canola | cytosol | 18.94 | 23.0 |
| CDY13257 | Canola | cytosol | 18.76 | 22.8 |
| CDX70396 | Canola | plastid | 14.27 | 18.57 |
| CDX78425 | Canola | plastid | 14.18 | 18.45 |
| CDX97117 | Canola | plastid | 14.09 | 18.29 |
| CDX86788 | Canola | cytosol | 19.03 | 18.01 |
| CDY71479 | Canola | cytosol | 6.13 | 15.55 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | GO:A0A078HTP2 | UniProt:A0A078HTP2 | InterPro:AP3B_C | InterPro:AP3_beta |
| InterPro:AP_beta | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY41227 | ProteinID:CDY41227 | ProteinID:CDY41227.1 |
| InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | EnsemblPlantsGene:GSBRNA2T00072647001 | InterPro:IPR011989 | PFAM:PF01602 |
| PFAM:PF14796 | PIRSF:PIRSF037096 | PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 |
| UniParc:UPI0004EF1D25 | SEG:seg | : | : | : | : |
Description
BnaC08g26310DAP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078HTP2]
Coordinates
chrLK032493:+:199818..204788
Molecular Weight (calculated)
120891.0 Da
IEP (calculated)
5.032
GRAVY (calculated)
-0.071
Length
1093 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFNQFGSTAE TLSKASAAVL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLHYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVGKCAR DPAVYVRKCA ANALPKLHDL RLEEHAPSIE ELVGILLNDH SPGVVGAAAA
0201: AFTCICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSLHG LDSNGFYEKD GLVSDKGDGD KSDSFDANLV SLVSKCYIEG
0301: PDEYLKDTTS VGDNEDVKIL LQCTSPLLWS NNSAVVLAAA GVQWIMAPLE DVKRIVKPLL FLLRSSTASK YVVLCNILVF AKAVPSLFAP HFEDFFICSS
0401: DAYQVKAHKL EMLSLIATTS SISSILREFE DYIKDPDRRF AADTVAAIGL CAKRLPEIPT ACLNGLLALV KQESFAGDLE LVDGEAGVLV QAVMSIQTII
0501: ERDPLSHEKV IIQLFRSLDS VKVAAARATI IWMVGVYCSL GHIIPKMLTT ITKYLAWSFK SEASETKLQI LNTAAKVLIS AEVEDFQMLK KIVLYLLELG
0601: GCDLNYDVRD RTRFLKKMLS YKLACHEPAE DSVASQENIA EHVVEHVFGR KLKPFSPLNL HNRFYLPGSL SQIVLHAAPG YEPLPKPCSF VFEEHDQLSD
0701: SDRQREATSD LNGSQESSET VDEDGSSEYD SESYNGSEFS SDGDERNEAN DAADPLIQFS EITVSTDQEE LRSKRALDLW LDEESSTSNQ TPSALDRNQS
0801: SYAKISIGDI GSRVKPKSYT LLDPGNGNGL KIDYTFLSEV STASPLHVCV EVLFQNSSTE PILEVNLEDE EAMNVSDSAE QTLVGKANAS YNNVPTLIPM
0901: EELSCLEPGQ SAKRLIQVRF HHHLLPMRLS LHYNGKKVPV KLRPDLGYLV KPYSITIQEF LATESRLPGM FEYSRRCTFT DHVKDTRMEN GKDKFLSICE
1001: SITLKVLSNS NLHLVSVDLP VANTLEDATG LRLRFSSKIL SSEIPLLITI TVQGKCNEDL NLTVKINCEE TVFGLNLLNR IANFMVETSS SAS
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVGKCAR DPAVYVRKCA ANALPKLHDL RLEEHAPSIE ELVGILLNDH SPGVVGAAAA
0201: AFTCICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSLHG LDSNGFYEKD GLVSDKGDGD KSDSFDANLV SLVSKCYIEG
0301: PDEYLKDTTS VGDNEDVKIL LQCTSPLLWS NNSAVVLAAA GVQWIMAPLE DVKRIVKPLL FLLRSSTASK YVVLCNILVF AKAVPSLFAP HFEDFFICSS
0401: DAYQVKAHKL EMLSLIATTS SISSILREFE DYIKDPDRRF AADTVAAIGL CAKRLPEIPT ACLNGLLALV KQESFAGDLE LVDGEAGVLV QAVMSIQTII
0501: ERDPLSHEKV IIQLFRSLDS VKVAAARATI IWMVGVYCSL GHIIPKMLTT ITKYLAWSFK SEASETKLQI LNTAAKVLIS AEVEDFQMLK KIVLYLLELG
0601: GCDLNYDVRD RTRFLKKMLS YKLACHEPAE DSVASQENIA EHVVEHVFGR KLKPFSPLNL HNRFYLPGSL SQIVLHAAPG YEPLPKPCSF VFEEHDQLSD
0701: SDRQREATSD LNGSQESSET VDEDGSSEYD SESYNGSEFS SDGDERNEAN DAADPLIQFS EITVSTDQEE LRSKRALDLW LDEESSTSNQ TPSALDRNQS
0801: SYAKISIGDI GSRVKPKSYT LLDPGNGNGL KIDYTFLSEV STASPLHVCV EVLFQNSSTE PILEVNLEDE EAMNVSDSAE QTLVGKANAS YNNVPTLIPM
0901: EELSCLEPGQ SAKRLIQVRF HHHLLPMRLS LHYNGKKVPV KLRPDLGYLV KPYSITIQEF LATESRLPGM FEYSRRCTFT DHVKDTRMEN GKDKFLSICE
1001: SITLKVLSNS NLHLVSVDLP VANTLEDATG LRLRFSSKIL SSEIPLLITI TVQGKCNEDL NLTVKINCEE TVFGLNLLNR IANFMVETSS SAS
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.