Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 95.76 | 94.46 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 95.49 | 94.02 |
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 52.03 | 89.12 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 94.84 | 87.44 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 47.15 | 87.07 |
| Os01t0973300-01 | Rice | cytosol | 63.17 | 74.0 |
| EES13267 | Sorghum | cytosol | 74.4 | 73.39 |
| Zm00001d035093_P002 | Maize | plastid | 74.03 | 70.4 |
| GSMUA_Achr10P... | Banana | cytosol | 25.23 | 60.62 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 52.58 | 50.09 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 52.39 | 50.0 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 51.93 | 49.91 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 51.84 | 49.82 |
| Bra007167.1-P | Field mustard | cytosol | 45.86 | 49.8 |
| CDY41227 | Canola | cytosol | 49.36 | 49.04 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 49.26 | 48.99 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 48.53 | 47.26 |
| PGSC0003DMT400076344 | Potato | cytosol | 26.15 | 44.44 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 28.27 | 43.12 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 27.53 | 41.99 |
| TraesCS4A01G166200.2 | Wheat | cytosol | 19.52 | 23.53 |
| TraesCS3A01G228800.1 | Wheat | plastid | 14.73 | 19.02 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006896 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019725 | GO:GO:0030117 |
| GO:GO:0030123 | GO:GO:0051453 | GO:GO:0080171 | InterPro:IPR011989 | PFAM:PF01602 | PIRSF:PIRSF037096 |
| PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS3A01G530000 | EnsemblPlants:TraesCS3A01G530000.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:743185187..743192755
Molecular Weight (calculated)
119458.0 Da
IEP (calculated)
4.855
GRAVY (calculated)
0.045
Length
1086 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGTDAHLYDD PEDAAIPALL DSRFDGDKVD ALKRLLALIA QGVDVAHLFP QVVKNVAAQS LEVKKLVYLY LLHYAETRQN EALLSINIFQ KDLSDINPLV
0101: RAWALRTMAG IRLHVVAPLV LVAVKKCARD PSPYVRKCAA YALCKLYDLL PEENTTLEEI VDVLLGDSSF GVVGAATVAF KSVCPNCLAL IAKHFRRLCE
0201: TLPDIEEWYQ ITLIEILLRY VIAKHGLVKD SVMFAAELSL ETQAGRDSVP VSNISSTQAE TIVNGGSGTM PNIMLFRHYI EEYSGAFDRD DDKFSFPSVT
0301: TSTNDDVVIL LKCTSPLLWS QNSAVILAAA SVHWIMAPAE EVKRIVGPIL FTLRSSPDAT YVMLGNILVF AKTAPLLFAS YYEDFFICAS DPYQTRALKL
0401: EILTTIATES SIPAILEEFQ DYIKDPNRRF VADTVAAIAL CALKLPSITS SCLEGLLALV LYELSITNSV HLNEEDAVLV QAILSIKEIV KIDAASHEKV
0501: IIRLVRCLDT IMEPAARSLI IWIFGEYSST GNLIPKIAPV VLKYLAWSFA AEVLETKLQI LNASAKVIIH SAEERLEEFK RIVTYVIQLA ACDMNYDVRD
0601: RARFLSGLLP CCANENDSSC RAQNVDVIKE LADHIFGGKI PPASNSDSNY RIYLPGSLSQ VVLHAAPGYA PLPKPQSMIL IHKTVEPTRG IADSSEGTNS
0701: DAESGSSRDE SGSVYDSESE AGSDSNDDGH NLHRQKENKE APLIHMYDGN VDQAYAGQAV DENLASLIST DLTELMSKSA LESWLDEAPA APLVQDSVQT
0801: SCARVSFTTR SFERKPKLHR LLDPSDSDGL SVLYAFSSEV SPKSRLLVCV DLFVENVTTE QLADITIKSE EASGSKGGMD QTSEGSASIP TLVPVEEIQS
0901: LAPEQTAKML LQVHFHHHLL PLKLSVLCNG KRHPAKLHPD IAYFVRPLPM DLNAFLCKEN QLRGMFEYAR RCTFKDHLQK HEQIEESTDH NTDKNLLVAQ
1001: TLASKVLSNA NVHLVSMDMP VTFSIDDASG LCWRFSSEIL STSNPCLITV VADGHTSEPL DLTVKVNSED TAFGLNLLNR VVAIIE
0101: RAWALRTMAG IRLHVVAPLV LVAVKKCARD PSPYVRKCAA YALCKLYDLL PEENTTLEEI VDVLLGDSSF GVVGAATVAF KSVCPNCLAL IAKHFRRLCE
0201: TLPDIEEWYQ ITLIEILLRY VIAKHGLVKD SVMFAAELSL ETQAGRDSVP VSNISSTQAE TIVNGGSGTM PNIMLFRHYI EEYSGAFDRD DDKFSFPSVT
0301: TSTNDDVVIL LKCTSPLLWS QNSAVILAAA SVHWIMAPAE EVKRIVGPIL FTLRSSPDAT YVMLGNILVF AKTAPLLFAS YYEDFFICAS DPYQTRALKL
0401: EILTTIATES SIPAILEEFQ DYIKDPNRRF VADTVAAIAL CALKLPSITS SCLEGLLALV LYELSITNSV HLNEEDAVLV QAILSIKEIV KIDAASHEKV
0501: IIRLVRCLDT IMEPAARSLI IWIFGEYSST GNLIPKIAPV VLKYLAWSFA AEVLETKLQI LNASAKVIIH SAEERLEEFK RIVTYVIQLA ACDMNYDVRD
0601: RARFLSGLLP CCANENDSSC RAQNVDVIKE LADHIFGGKI PPASNSDSNY RIYLPGSLSQ VVLHAAPGYA PLPKPQSMIL IHKTVEPTRG IADSSEGTNS
0701: DAESGSSRDE SGSVYDSESE AGSDSNDDGH NLHRQKENKE APLIHMYDGN VDQAYAGQAV DENLASLIST DLTELMSKSA LESWLDEAPA APLVQDSVQT
0801: SCARVSFTTR SFERKPKLHR LLDPSDSDGL SVLYAFSSEV SPKSRLLVCV DLFVENVTTE QLADITIKSE EASGSKGGMD QTSEGSASIP TLVPVEEIQS
0901: LAPEQTAKML LQVHFHHHLL PLKLSVLCNG KRHPAKLHPD IAYFVRPLPM DLNAFLCKEN QLRGMFEYAR RCTFKDHLQK HEQIEESTDH NTDKNLLVAQ
1001: TLASKVLSNA NVHLVSMDMP VTFSIDDASG LCWRFSSEIL STSNPCLITV VADGHTSEPL DLTVKVNSED TAFGLNLLNR VVAIIE
0001: MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
0101: NEALLSINYF QKDLGDPNPL VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE ELVGILLNDH SPGVVGAAAA
0201: AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
0301: YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA
0401: KAVPSLFAPH FENFFICSSD AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT CLDGLLALVR QESFAGDFES
0501: ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
0601: EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY
0701: EPLPKPCSFV YEEQDQLSDL DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ ISETSVSADQ EELRSRRALD
0801: LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
0901: SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT
1001: FDDHVKDSRT ENGKDKFLSI CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE VLNLTVKINC EETVFGLNLL
1101: NRIANFMVEP SSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.