Factsheet for GSMUA_Achr7P15120_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	30.62	48.23
Os01t0973300-01	Rice	cytosol	37.92	29.13
TraesCS3A01G530000.1	Wheat	cytosol	43.12	28.27
TraesCS3B01G599600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	43.68	28.2
Bra007167.1-P	Field mustard	cytosol	39.47	28.1
TraesCS3D01G535400.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	43.12	27.88
VIT_13s0019g01530.t01	Wine grape	cytosol	43.26	27.02
KRH15094	Soybean	cytosol, peroxisome, plastid	42.84	26.99
KRH73041	Soybean	cytosol, peroxisome, plastid	42.7	26.9
EES13267	Sorghum	cytosol	41.57	26.88
HORVU3Hr1G115880.4	Barley	cytosol, plastid	43.96	26.57
Solyc06g043030.2.1	Tomato	cytosol, peroxisome, plastid	41.99	26.27
CDY40224	Canola	cytosol, plasma membrane, plastid	39.89	26.01
CDY41227	Canola	cytosol	39.89	25.98
Zm00001d035093_P002	Maize	plastid	41.01	25.57
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	25.56	25.56
AT3G55480.2	Thale cress	cytosol, plasma membrane, plastid	39.89	25.47
PGSC0003DMT400076344	Potato	cytosol	18.12	20.19
TraesCS3B01G600100.1	Wheat	cytosol, golgi, mitochondrion, nucleus	16.57	18.61
TraesCS3B01G599800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	14.19	17.18
GSMUA_Achr1P24200_001	Banana	cytosol	17.13	13.53
GSMUA_AchrUn_...	Banana	cytosol	17.13	13.53
GSMUA_Achr1P13670_001	Banana	cytosol	15.87	13.42

Protein Annotations

MapMan:22.1.5.2	InterPro:AP3_beta	InterPro:AP_beta	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	EnsemblPlantsGene:GSMUA_Achr7G15120_001	EnsemblPlants:GSMUA_Achr7P15120_001	EnsemblPlants:GSMUA_Achr7T15120_001	UniProt:M0THP9
PFAM:PF01602	PANTHER:PTHR11134	PANTHER:PTHR11134:SF1	SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI000296AABB
SEG:seg	:	:	:	:	:

Description

Putative AP3-complex subunit beta-A [Source:GMGC_GENE;Acc:GSMUA_Achr7G15120_001]

Coordinates

chr7:+:12123995..12131217

Molecular Weight (calculated)

80008.1 Da

IEP (calculated)

5.301

GRAVY (calculated)

0.055

Length

712 amino acids

Sequence
(BLAST)

001: MAGIREHAVA PLVLAAISKC ARDPSSYVRR CAAYALPKLY DLHHDEDSAA LEELVDILLS DHSLGVVGAA AVAFKPVCPS RLYLIAKSFR RLCETLPDVE
101: EWSQIVLIKI LLRYVIARHG LVKESIMFTS NSVLTSQEDE NFAAFGGENN LDLPLTSTTN DDVDILLQCA SPFLWSHNSA VVFGAATVHW IMAPREEVER
201: IIKPILFILR SFQASKYILC NTLVFAKAAP QIFLPYYEEF FVCSSDSYQT RALKLEILST IATESSVPNI LEEFERTLNC KPDNNQYRYK VYIRVTLSIC
301: CLAVILFLVC CFWSALLGLK YPSPLVSQML ISYHVFLLLQ FIIYCLLFSH YMSLMKVIVR LACNLDKVKE PAARALIVWI IGEYNSVGQI IPKVVPSVLK
401: YLAWTFMSEE LETKLQILNT AAKVLLCAHG EDLLTFRKIL SYVIELSKYD LNYDVRDRAC FILKLMSHNL TLSSEEAITS FALQNGGIHH EFAEKIFSGE
501: IHSGIAKSLR IYPPGSLSQI VFHAAPGYEP LPQPRSLHAE NINLCTEFGY ETKQPDLKMD KSNSFGTDDP DMSSGSLFEE SGSVYDFHHY FIKSDGEDIT
601: SSNSNEIEHS SSESMRDTRD DRENTLINIS YASADYDQAS QSAKENLSAF ISTDLAELIS KSSLESWLDE RPGLTSTQMP QQPSGRISIN NLNCTVTPKL
701: HMLLDPTNEL HF

Best Arabidopsis Sequence Match ( AT3G55480.1 )
(BLAST)

001: MAGIRLHVIA PLALAAVSKC ARDPAVYVRR CAANALPKLH DLRLEEHASA IEELVGILLN DHSPGVVGAA AAAFTSICPN NFKLIGKNYK KLCQILPDVE
101: EWGQILLIGT LLRYVVARHG LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY LSRSSCTDTV SSAFDTKETT
201: SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301: LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK
401: VLIQLFRSLD SIKVAAARAT IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML KRIVVYVFEL GEYDLSYDIR
501: DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601: DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS
701: IGDVGSRVKP KSYSLVDPGN GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK ANASYNNIPT LIPMEEISCL
801: EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901: LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI NCEETVFGLN LLNRIANFMV EPSSSAT

Arabidopsis Description

PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.