Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G600100.1 | Wheat | cytosol, golgi, mitochondrion, nucleus | 47.57 | 69.56 |
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 44.01 | 69.39 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 74.0 | 63.17 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 74.54 | 62.65 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 74.11 | 62.4 |
| EES13267 | Sorghum | cytosol | 72.49 | 61.04 |
| Zm00001d035093_P002 | Maize | plastid | 72.82 | 59.11 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 74.11 | 58.32 |
| PGSC0003DMT400076344 | Potato | cytosol | 30.1 | 43.66 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 32.47 | 42.28 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 49.73 | 40.44 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 48.33 | 39.65 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 48.0 | 39.38 |
| CDY41227 | Canola | cytosol | 45.63 | 38.7 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 47.46 | 38.66 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 45.31 | 38.46 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 29.13 | 37.92 |
| Bra007167.1-P | Field mustard | cytosol | 40.02 | 37.1 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 44.55 | 37.04 |
| GSMUA_Achr10P... | Banana | cytosol | 15.97 | 32.74 |
| Os03t0355600-01 | Rice | plasma membrane | 16.61 | 17.25 |
| Os01t0626200-01 | Rice | cytosol | 0.65 | 11.32 |
| Os01t0626100-01 | Rice | plasma membrane | 0.86 | 3.88 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like |
| InterPro:ARM-type_fold | ProteinID:BAF07460.1 | ProteinID:BAS76444.1 | InterPro:Clathrin/coatomer_adapt-like_N | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0006896 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0019725 | GO:GO:0030117 | GO:GO:0030123 | GO:GO:0051453 |
| GO:GO:0080171 | InterPro:IPR011989 | EnsemblPlantsGene:Os01g0973300 | EnsemblPlants:Os01t0973300-01 | PFAM:PF01602 | PFAM:PF14796 |
| PANTHER:PTHR11134 | PANTHER:PTHR11134:SF1 | UniProt:Q0JFL8 | SMART:SM01355 | SUPFAM:SSF48371 | UniParc:UPI0000DD8EF1 |
Description
Armadillo-like helical domain containing protein. (Os01t0973300-01)
Coordinates
chr1:+:42971420..42976876
Molecular Weight (calculated)
102048.0 Da
IEP (calculated)
4.718
GRAVY (calculated)
-0.031
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: HDLLPDETTS LEDTVDVLFS DNSPGVVGAT AVAFNSVCPN CLPLISKHFQ RLCETLPDIE EWAQILLIDI ILRYVIARHG LVKDSSIFAS NLTLKSQGSG
101: DSALIGNETC GTTSTITLFR HYIEEYSECL EGDIINCSSV TSSTNNDVAL LLKCTSPLLW SRNSGVILAA ASVHWIMAPV DQLNRVVGPI LFTLRSSPDA
201: TYVMLGNILV FAKTAPQLFA PFYEDFFICT SDPYQTKALK LEILTTIATE SSIPAIFEEF QDYIKEPDRR FVADTVAAIA LCAQKLPSIT TSCLGGLLAL
301: VFYESSISDS ANFDGEAAVL VQAILSIKAI VRTDPASHEK VIVRLVHSLD KIKEPAARSL IIWIFGEYSS IGNIIPKITP AVLKYLAWSF AAEMLETKLQ
401: ILNAAAKVII HSPEEHLEEF KKIMAHVIKL ATCDLSYDVR DRARFISRLL PYSTTYLNGN NSSCQSHNED MFKELANHIF DGKMPSTFHP TNNYRIYLPG
501: SLSQVILHAA PGYAPLPKPQ SMELIHKTME PTRGVGNSSE SINSDAESGS STYDGGSVYD SESEVDGSSD RNAADSNTKD NQEDPLVHVY DASVDQGQTA
601: RDVEDNFASL ITTDLTELMS KSALETWLDE APAEPVQVST QASSARVSFT NRSFERKPKL HMLLDPSNSN GLSVLYAFSS EVSPVSRLLV CVDLLFENVS
701: TNQLADITIK SEEASGSEDG LDQTLQGSAS VPTIVLDKEI QLLAPEQTEK MVLQVHFHHH LLPLKLSVLC NGKRHPAKLH PDIAYFVRPL PMDLNAFLCK
801: ENQLRGMFEY ARRCTFKDHL QKLEHNDDSE EHTDKNLLIA QSLASKILSN ANFHLVSMDM PVTFSIEDAS GLCWRFSSEI LSTSNPCLIT ILAEGHISEP
901: LDLTAKVNSE DTAFGLNLLN RVVAIIE
101: DSALIGNETC GTTSTITLFR HYIEEYSECL EGDIINCSSV TSSTNNDVAL LLKCTSPLLW SRNSGVILAA ASVHWIMAPV DQLNRVVGPI LFTLRSSPDA
201: TYVMLGNILV FAKTAPQLFA PFYEDFFICT SDPYQTKALK LEILTTIATE SSIPAIFEEF QDYIKEPDRR FVADTVAAIA LCAQKLPSIT TSCLGGLLAL
301: VFYESSISDS ANFDGEAAVL VQAILSIKAI VRTDPASHEK VIVRLVHSLD KIKEPAARSL IIWIFGEYSS IGNIIPKITP AVLKYLAWSF AAEMLETKLQ
401: ILNAAAKVII HSPEEHLEEF KKIMAHVIKL ATCDLSYDVR DRARFISRLL PYSTTYLNGN NSSCQSHNED MFKELANHIF DGKMPSTFHP TNNYRIYLPG
501: SLSQVILHAA PGYAPLPKPQ SMELIHKTME PTRGVGNSSE SINSDAESGS STYDGGSVYD SESEVDGSSD RNAADSNTKD NQEDPLVHVY DASVDQGQTA
601: RDVEDNFASL ITTDLTELMS KSALETWLDE APAEPVQVST QASSARVSFT NRSFERKPKL HMLLDPSNSN GLSVLYAFSS EVSPVSRLLV CVDLLFENVS
701: TNQLADITIK SEEASGSEDG LDQTLQGSAS VPTIVLDKEI QLLAPEQTEK MVLQVHFHHH LLPLKLSVLC NGKRHPAKLH PDIAYFVRPL PMDLNAFLCK
801: ENQLRGMFEY ARRCTFKDHL QKLEHNDDSE EHTDKNLLIA QSLASKILSN ANFHLVSMDM PVTFSIEDAS GLCWRFSSEI LSTSNPCLIT ILAEGHISEP
901: LDLTAKVNSE DTAFGLNLLN RVVAIIE
001: MAGIRLHVIA PLALAAVSKC ARDPAVYVRR CAANALPKLH DLRLEEHASA IEELVGILLN DHSPGVVGAA AAAFTSICPN NFKLIGKNYK KLCQILPDVE
101: EWGQILLIGT LLRYVVARHG LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY LSRSSCTDTV SSAFDTKETT
201: SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301: LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK
401: VLIQLFRSLD SIKVAAARAT IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML KRIVVYVFEL GEYDLSYDIR
501: DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601: DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS
701: IGDVGSRVKP KSYSLVDPGN GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK ANASYNNIPT LIPMEEISCL
801: EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901: LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI NCEETVFGLN LLNRIANFMV EPSSSAT
101: EWGQILLIGT LLRYVVARHG LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY LSRSSCTDTV SSAFDTKETT
201: SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301: LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK
401: VLIQLFRSLD SIKVAAARAT IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML KRIVVYVFEL GEYDLSYDIR
501: DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601: DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS
701: IGDVGSRVKP KSYSLVDPGN GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK ANASYNNIPT LIPMEEISCL
801: EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901: LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI NCEETVFGLN LLNRIANFMV EPSSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.