Factsheet for Os01t0626100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 5

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0153g00080.t01	Wine grape	cytosol	39.32	55.86
TraesCS3D01G226500.1	Wheat	plastid	89.32	21.88
TraesCS3B01G255800.2	Wheat	plastid	89.32	21.88
TraesCS3A01G228800.1	Wheat	plastid	89.32	21.88
EES01104	Sorghum	plastid	88.83	21.66
HORVU3Hr1G055990.1	Barley	cytosol, plastid	89.32	21.2
Zm00001d044164_P002	Maize	plastid	87.86	21.19
Zm00001d011411_P002	Maize	plastid	88.35	21.06
GSMUA_Achr1P13670_001	Banana	cytosol	75.24	18.41
KRH62012	Soybean	plastid	70.39	17.16
KRH52665	Soybean	plastid	69.42	16.92
CDX97117	Canola	plastid	67.96	16.63
Bra006100.1-P	Field mustard	plastid	66.99	16.43
CDX78425	Canola	plastid	66.99	16.43
CDX70396	Canola	plastid	66.99	16.43
Solyc08g068210.2.1	Tomato	plastid	66.5	16.31
PGSC0003DMT400037585	Potato	cytosol	66.02	16.19
AT5G11490.2	Thale cress	cytosol, plastid	66.5	16.12
VIT_04s0008g03880.t01	Wine grape	cytosol, plastid	65.53	16.0
Os03t0355600-01	Rice	plasma membrane	35.92	8.29
CDX70642	Canola	cytosol	2.43	2.38
Os01t0973300-01	Rice	cytosol	3.88	0.86
Os01t0626200-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	EMBL:AK066892	InterPro:AP_beta	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAF05539.1	ProteinID:BAS73252.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030131
GO:GO:0030276	InterPro:IPR011989	EnsemblPlantsGene:Os01g0626100	EnsemblPlants:Os01t0626100-01	PFAM:PF01602	PANTHER:PTHR11134
PANTHER:PTHR11134:SF26	UniProt:Q0JL39	SUPFAM:SSF48371	UniParc:UPI0000DD8C12	SEG:seg	:

Description

Armadillo-like helical domain containing protein. (Os01t0626100-01)

Coordinates

chr1:+:24994743..24997782

Molecular Weight (calculated)

22006.7 Da

IEP (calculated)

7.769

GRAVY (calculated)

0.136

Length

206 amino acids

Sequence
(BLAST)

001: MAPTAPTAAK SASPSQPSGK SEVADLKQQL RQLAGSRAPD ADDQRRDVFK RVISCMTAGI DVSAAFGEMV LCSATSDVVL KKMCYLYVGV HARNHPDLAL
101: LTINFLQRDC HDQDPTIRGL ALRSLCSLRV PNLVEYLVSP LATGLKDPSA YVRMIAAVGA AKLYHISATA CLDADLPAAL KALMLSDPDA QVSCHSTNNV
201: VIIMQL

Best Arabidopsis Sequence Match ( AT5G11490.2 )
(BLAST)

001: MAPPAASQRY PSPSQPSGKS EVSDLKTQLR QLAGSRAPGV DDSKRDLYKK VISYMTIGID VSSVFGEMVM CSATSDIVLK KMCYLYVGNY AKGNPDLSLL
101: TINFLQRDCK DEDPMIRGLA LRSLCSLRVP NLVEYLVGPL GSGLKDNNSY VRTIAVTGVL KLYHISPSTC IDADFPATLK SLMLHDSDAQ VVANCLSALQ
201: EIWSLEASHS EEACREKESL LSKPVIYYFL NRIKEFNEWA QCLILELAVK YVPSDSNDIF DIMNLLEDRL QHANGAVVLA TVKVFLQLTL SMTDVHQQVY
301: ERIKSPLLTL VSSGSPEQSY AILSHLHLLV VRAPFIFAAD YKHFYCQYNE PSYVKKLKLE MLTAVANESN TYEIVTELCE YAANVDIAIA RESIRAVGKI
401: ALQQYDVNAI VDRLLQFLEM EKDYVTAETL VLVKDLLRKY PQWSHDCISV VGGISSKNIQ EPKAKAALIW MLGEYAQDMS DAPYVLENLI ENWEEEHSAE
501: VRLHLLTAAM KCFFKRAPET QKALGTALAA GIADFHQDVH DRALFYYRVL QYDVHVAERV VSPPKQAVSV FADTQSSEIK DRVFDEFNSL SVIYQKPSYM
601: FTDKEHRGPF EFSDEVGNIS ITPEASSDIV PAQQYEANDK DLLLGIDEKD ENKGVSNNNG SAYTAPSLES SSNITSQMQE LAISGPATSA TTPQSFGFDD
701: LFGLGLSTAP APTPSPPLLK LNARAALDPG AFQQKWRQLP ISLTQECSVN PQGIAALTVP QSLIKHMQSH SIHCIASGGQ SPNFKFFFFA QKESEPSNYL
801: TECIINTSSA KAQIKVKADE QSTCQAFTTV FETALSKFVS LTFDFVSLCY

Arabidopsis Description

Beta-adaptin-like protein [Source:UniProtKB/TrEMBL;Acc:F4JXV9]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.