Factsheet for HORVU3Hr1G055990.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G228800.1	Wheat	plastid	95.85	98.93
TraesCS3D01G226500.1	Wheat	plastid	95.39	98.45
TraesCS3B01G255800.2	Wheat	plastid	95.28	98.34
Os01t0626100-01	Rice	plasma membrane	21.2	89.32
EES01104	Sorghum	plastid	86.06	88.4
Zm00001d044164_P002	Maize	plastid	85.14	86.53
Zm00001d011411_P002	Maize	plastid	84.68	85.07
GSMUA_Achr1P13670_001	Banana	cytosol	73.73	76.01
KRH62012	Soybean	plastid	72.12	74.08
KRH52665	Soybean	plastid	72.0	73.96
VIT_04s0008g03880.t01	Wine grape	cytosol, plastid	69.59	71.56
PGSC0003DMT400037585	Potato	cytosol	68.32	70.6
Solyc08g068210.2.1	Tomato	plastid	67.86	70.12
CDX78425	Canola	plastid	66.94	69.17
Bra006100.1-P	Field mustard	plastid	66.94	69.17
CDX70396	Canola	plastid	66.82	69.05
CDX97117	Canola	plastid	66.71	68.76
AT5G11490.2	Thale cress	cytosol, plastid	66.94	68.35
CDX70642	Canola	cytosol	16.01	66.19
VIT_00s0153g00080.t01	Wine grape	cytosol	10.6	63.45
Os01t0626200-01	Rice	cytosol	2.76	45.28
HORVU4Hr1G045980.10	Barley	cytosol	27.42	26.47
HORVU3Hr1G115880.4	Barley	cytosol, plastid	18.32	13.5

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.5.2.2.2	Gene3D:3.30.310.10	UniProt:A0A287L4R4	InterPro:AP_beta	InterPro:AP_complex_bsu_1_2_4
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:B-adaptin_app_sub_C	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117
GO:GO:0030124	GO:GO:0030131	GO:GO:0030276	EnsemblPlantsGene:HORVU3Hr1G055990	EnsemblPlants:HORVU3Hr1G055990.1	InterPro:IPR011989
InterPro:IPR012295	PFAM:PF01602	PFAM:PF09066	PIRSF:PIRSF002291	PANTHER:PTHR11134	PANTHER:PTHR11134:SF26
SMART:SM01020	SUPFAM:SSF48371	InterPro:TBP_dom_sf	UniParc:UPI000B45F989	SEG:seg	:

Description

Beta-adaptin-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287L4R4]

Coordinates

chrchr3H:+:419433936..419446361

Molecular Weight (calculated)

95605.9 Da

IEP (calculated)

5.427

GRAVY (calculated)

-0.157

Length

868 amino acids

Sequence
(BLAST)

001: GQIQVPTGQN HHLQSSSPRA PRSKPSAMAP TAPSPAKSAS PSQPSGKSEV SDLKQQLRQL AGSRAPDADD QRRDVFKRVI SCMTAGIDVS AAFGEMVLCS
101: ATSDVVLKKM CYLYVGVHAR AHPDLALLTI NFLQRDCRDQ DPTIRGLALR SLCSLRVPNL VEYLVTPLTT GLKDPSAYVR MVAAVGAAKL YHISATTCLD
201: ADLPAALKAL MLSDPDAQVV ANCLHSLLEI WTLEAANSEA AGREIETLYS KPVVFYLLNK IKEFSEWAQC HVLELASKFL PSDNNEIFDI MNLLEDRLQH
301: ANGAVVLATI KVFLHLTMSM TDVHQQVYER IKAPLLTLVG AGSPEQSYSV LCHLHLLVMR APMLFSSDYK SFYCQFSDPS YVKKLKLEML TAIANESNTY
401: EIVTELCEYA GNVDVPIARE SIRAVGKIAL QQYDVNAIVD RLLQFLEMDK DYVTAETLVL VKDLLRKYPQ WSHDCIAVVG NISSQNIQEP KGKAALIWML
501: GEYSQDMHDA PYVLENIVVN WDEEQSPEVR LHLLTAVMKC FFKRPPETQK TLGATLAAGL ADTHQDVHDR ALFYYRLLQY DPAVAERVVN PPKQAVSVFA
601: DTQSSEIKDR IFDEFNSLSV VYQKPSYMFT DKEHRGTFEY SEDLANLTVG AEAPETVISA QRYQENDNDL LLSTSDKEDN GIRSSNGSYT STYNAPSDLL
701: SSQTPAETAL INPGSSTYST QTNFSLDDLL GLGVPDTPAP PPPPALALNS KPVLDPPTFQ KKWGQLALSF SQECSLSPQG AASLMNPQSL IRHMQSNYIQ
801: CIASGGQPPN YKFYFYGQKA GAAAVYLVEC IVNTASAKAQ LKIKVEDGTT ADAFSTLFQS VLSQFGRS

Best Arabidopsis Sequence Match ( AT5G11490.1 )
(BLAST)

001: MAPPAASQRY PSPSQPSGKS EVSDLKTQLR QLAGSRAPGV DDSKRDLYKK VISYMTIGID VSSVFGEMVM CSATSDIVLK KMCYLYVGNY AKGNPDLSLL
101: TINFLQRDCK DEDPMIRGLA LRSLCSLRVP NLVEYLVGPL GSGLKDNNSY VRTIAVTGVL KLYHISPSTC IDADFPATLK SLMLHDSDAQ VVANCLSALQ
201: EIWSLEASHS EEACREKESL LSKPVIYYFL NRIKEFNEWA QCLILELAVK YVPSDSNDIF DIMNLLEDRL QHANGAVVLA TVKVFLQLTL SMTDVHQQVY
301: ERIKSPLLTL VSSGSPEQSY AILSHLHLLV VRAPFIFAAD YKHFYCQYNE PSYVKKLKLE MLTAVANESN TYEIVTELCE YAANVDIAIA RESIRAVGKI
401: ALQQYDVNAI VDRLLQFLEM EKDYVTAETL VLVKDLLRKY PQWSHDCISV VGGISSKNIQ EPKAKAALIW MLGEYAQDMS DAPYVLENLI ENWEEEHSAE
501: VRLHLLTAAM KCFFKRAPET QKALGTALAA GIADFHQDVH DRALFYYRVL QYDVHVAERV VSPPKQAVSV FADTQSSEIK DRVFDEFNSL SVIYQKPSYM
601: FTDKEHRGPF EFSDEVGNIS ITPEASSDIV PAQQYEANDK DLLLGIDEKD ENKGVSNNNG SAYTAPSLES SSNITSQMQE LAISGPATSA TTPQSFGFDD
701: LFGLGLSTAP APTPSPPLLK LNARAALDPG AFQQKWRQLP ISLTQECSVN PQGIAALTVP QSLIKHMQSH SIHCIASGGQ SPNFKFFFFA QKESEPSNYL
801: TECIINTSSA KAQIKVKADE QSTCQAFTTV FETALSKFGM P

Arabidopsis Description

Beta-adaptin-like protein [Source:UniProtKB/TrEMBL;Acc:F4JXV9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.