Factsheet for TraesCS3D01G226500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G228800.1	Wheat	plastid	99.52	99.52
TraesCS3B01G255800.2	Wheat	plastid	99.41	99.41
HORVU3Hr1G055990.1	Barley	cytosol, plastid	98.45	95.39
Os01t0626100-01	Rice	plasma membrane	21.88	89.32
EES01104	Sorghum	plastid	88.94	88.52
Zm00001d044164_P002	Maize	plastid	87.99	86.65
Zm00001d011411_P002	Maize	plastid	87.63	85.3
GSMUA_Achr1P13670_001	Banana	cytosol	76.69	76.6
KRH62012	Soybean	plastid	74.55	74.2
KRH52665	Soybean	plastid	74.44	74.08
VIT_04s0008g03880.t01	Wine grape	cytosol, plastid	72.18	71.92
PGSC0003DMT400037585	Potato	cytosol	70.75	70.83
Solyc08g068210.2.1	Tomato	plastid	70.51	70.6
Bra006100.1-P	Field mustard	plastid	69.2	69.29
CDX78425	Canola	plastid	69.2	69.29
CDX70396	Canola	plastid	69.08	69.17
CDX97117	Canola	plastid	68.97	68.88
AT5G11490.2	Thale cress	cytosol, plastid	69.2	68.47
CDX70642	Canola	cytosol	16.41	65.71
VIT_00s0153g00080.t01	Wine grape	cytosol	10.94	63.45
Os01t0626200-01	Rice	cytosol	3.09	49.06
TraesCS4D01G166700.1	Wheat	cytosol	28.18	26.39
TraesCS3D01G535400.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	18.91	14.44

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.5.2.2.2	Gene3D:3.30.310.10	InterPro:AP_beta	InterPro:AP_complex_bsu_1_2_4	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:B-adaptin_app_sub_C	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030131
GO:GO:0030276	InterPro:IPR011989	InterPro:IPR012295	PFAM:PF01602	PFAM:PF09066	PIRSF:PIRSF002291
PANTHER:PTHR11134	PANTHER:PTHR11134:SF26	SMART:SM01020	SUPFAM:SSF48371	InterPro:TBP_dom_sf	EnsemblPlantsGene:TraesCS3D01G226500
EnsemblPlants:TraesCS3D01G226500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:308265354..308276466

Molecular Weight (calculated)

92678.4 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.119

Length

841 amino acids

Sequence
(BLAST)

001: MAPTAPSPAK SASPSQPSGK SEVSDLKQQL RQLAGSRAPD ADDQRRDVFK RVISCMTAGI DVSAAFGEMV LCSATSDVVL KKMCYLYVGV HARAHPDLAL
101: LTINFLQRDC RDQDPTIRGL ALRSLCSLRV PNLVEYLVTP LTTGLKDPSA YVRMVAAVGA AKLYHISATT CLDADLPAAL KALMLSDPDA QVVANCLHSL
201: LEIWTLEAAN SEAAGREIET LYSKPVVFYL LNKIKEFSEW AQCHVLELAS KFIPSDNNEI FDIMNLLEDR LQHANGAVVL ATIKVFLHLT MSMTDVHQQV
301: YERIKAPLLT LVGAGSPEQS YSVLCHLHLL VMRAPMLFSS DYKSFYCQFS DPSYVKKLKL EMLTAIANES NTYEIVTELC EYAGNVDVPI ARESIRAVGK
401: IALQQYDVNA IVDRLLQFLE MDKDYVTAET LVLVKDLLRK YPQWSHDCIA VVGNISSQNI QEPKGKAALI WMLGEYSQDM HDAPYVLENL VDNWDEEQSP
501: EVRLHLLTAV MKCFFKRPPE TQKALGATLA AGLADTHQDV HDRALFYYRL LQYDPAVAER VVNPPKQAVS VFADTQSSEI KDRIFDEFNS LSVVYQKPSY
601: MFTDKEHRGT FEYSEDLANL TVGAEAPETV ISAQRYQESD NDLLLSTSDK EDSGIRSSNG SYTSTYNAPS DLLSSQTPAE TALINPSSST YSTQTNFSLD
701: DLLGLGVPDA PAPPPPPALA LNSKPVLDPA TFQKKWGQLA LSFSQECSLS PQGAASLMNP QSLIRHMQSN YIQCIASGGQ PPNYKFYFYG QKAGAAAFYL
801: VECIVNTASA KAQLKIKAED GTTAEAFSTL FQSVLSQFGH S

Best Arabidopsis Sequence Match ( AT5G11490.1 )
(BLAST)

001: MAPPAASQRY PSPSQPSGKS EVSDLKTQLR QLAGSRAPGV DDSKRDLYKK VISYMTIGID VSSVFGEMVM CSATSDIVLK KMCYLYVGNY AKGNPDLSLL
101: TINFLQRDCK DEDPMIRGLA LRSLCSLRVP NLVEYLVGPL GSGLKDNNSY VRTIAVTGVL KLYHISPSTC IDADFPATLK SLMLHDSDAQ VVANCLSALQ
201: EIWSLEASHS EEACREKESL LSKPVIYYFL NRIKEFNEWA QCLILELAVK YVPSDSNDIF DIMNLLEDRL QHANGAVVLA TVKVFLQLTL SMTDVHQQVY
301: ERIKSPLLTL VSSGSPEQSY AILSHLHLLV VRAPFIFAAD YKHFYCQYNE PSYVKKLKLE MLTAVANESN TYEIVTELCE YAANVDIAIA RESIRAVGKI
401: ALQQYDVNAI VDRLLQFLEM EKDYVTAETL VLVKDLLRKY PQWSHDCISV VGGISSKNIQ EPKAKAALIW MLGEYAQDMS DAPYVLENLI ENWEEEHSAE
501: VRLHLLTAAM KCFFKRAPET QKALGTALAA GIADFHQDVH DRALFYYRVL QYDVHVAERV VSPPKQAVSV FADTQSSEIK DRVFDEFNSL SVIYQKPSYM
601: FTDKEHRGPF EFSDEVGNIS ITPEASSDIV PAQQYEANDK DLLLGIDEKD ENKGVSNNNG SAYTAPSLES SSNITSQMQE LAISGPATSA TTPQSFGFDD
701: LFGLGLSTAP APTPSPPLLK LNARAALDPG AFQQKWRQLP ISLTQECSVN PQGIAALTVP QSLIKHMQSH SIHCIASGGQ SPNFKFFFFA QKESEPSNYL
801: TECIINTSSA KAQIKVKADE QSTCQAFTTV FETALSKFGM P

Arabidopsis Description

Beta-adaptin-like protein [Source:UniProtKB/TrEMBL;Acc:F4JXV9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.