Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G599800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 85.17 | 91.84 |
| TraesCS3B01G599600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 90.85 | 52.22 |
| TraesCS3A01G530000.1 | Wheat | cytosol | 89.12 | 52.03 |
| TraesCS3D01G535400.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane | 88.17 | 50.77 |
| Os01t0973300-01 | Rice | cytosol | 69.56 | 47.57 |
| HORVU3Hr1G115880.4 | Barley | cytosol, plastid | 88.01 | 47.37 |
| PGSC0003DMT400076344 | Potato | cytosol | 41.96 | 41.63 |
| EES13267 | Sorghum | cytosol | 67.82 | 39.06 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 42.74 | 38.06 |
| Zm00001d035093_P002 | Maize | plastid | 66.09 | 36.69 |
| Solyc06g043030.2.1 | Tomato | cytosol, peroxisome, plastid | 43.53 | 24.25 |
| VIT_13s0019g01530.t01 | Wine grape | cytosol | 43.06 | 23.95 |
| KRH73041 | Soybean | cytosol, peroxisome, plastid | 42.43 | 23.81 |
| KRH15094 | Soybean | cytosol, peroxisome, plastid | 42.11 | 23.63 |
| CDY40224 | Canola | cytosol, plasma membrane, plastid | 39.91 | 23.17 |
| CDY41227 | Canola | cytosol | 39.91 | 23.15 |
| AT3G55480.2 | Thale cress | cytosol, plasma membrane, plastid | 39.43 | 22.42 |
| Bra007167.1-P | Field mustard | cytosol | 34.07 | 21.6 |
| GSMUA_Achr7P15120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 18.61 | 16.57 |
| TraesCS4B01G165000.1 | Wheat | cytosol, golgi | 14.67 | 10.36 |
| TraesCS3B01G255800.2 | Wheat | plastid | 11.04 | 8.32 |
| GSMUA_Achr10P... | Banana | cytosol | 1.42 | 1.99 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.1.5.2 | InterPro:AP3B_C | InterPro:AP3_beta | InterPro:AP_beta | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030123 | InterPro:IPR011989 | PFAM:PF01602 | PANTHER:PTHR11134 |
| PANTHER:PTHR11134:SF1 | SMART:SM01355 | SUPFAM:SSF48371 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G600100 | EnsemblPlants:TraesCS3B01G600100.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:820789324..820795599
Molecular Weight (calculated)
69940.4 Da
IEP (calculated)
5.049
GRAVY (calculated)
-0.070
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGRQLLVTA ETWYSYSCVV RQNRIVRWYS ILIICYWGSG GAKILLVIIR LVRCLDTIME PAARSLIIWI FGEYSSTGNL IPKIAPVVLK YLAWSFAAEV
101: LETKLQILNA SAKVIIHSAQ EQLEEFKMIV AYVIQLAACD MNYDVRDRAR FLSGLLPCCA TENDPSCRSQ NVDVIKELAD HIFGGKIPPA SNSDSNYRIY
201: LLGSLSQVVL HAAPGYAPLP KPQSMILIHK TVEPIRGVAD SSEGTNSDAE SGSSRDGSGS VYDSESEAGS DSIDDCHNLH RQEENQEAPL IHMYDGNVDQ
301: AYAGRAVDEN LASLISTDLT ELMSKSALES WLDEAPAAPL VVQDSVQTSC ARVSFTTRSF ERKPKLHRLL DPSASDALSV LYAFSSEVSP KSHLLVCVDL
401: FVENVTTEQL ADITIKSEEA SGSKGGMDQT SEGSANIPTL VPVEEIQSLA PEQTAKMLLQ VHFHHHLLPL KLSVLCNGKR HPAKLHPDIA YFVRPLPMDL
501: NAFLCKENQL RGMFEYARRC TFKDHLQKHE QTEESTDHNT DKNLLVAQTL ASKVLSNANV HLVSMDMPVT FSIDDASGLC WRFSSEILST SNPCLITIVA
601: DGHTSEPLDL TVKVNSEDTA FGLNLMNRIV AIIE
101: LETKLQILNA SAKVIIHSAQ EQLEEFKMIV AYVIQLAACD MNYDVRDRAR FLSGLLPCCA TENDPSCRSQ NVDVIKELAD HIFGGKIPPA SNSDSNYRIY
201: LLGSLSQVVL HAAPGYAPLP KPQSMILIHK TVEPIRGVAD SSEGTNSDAE SGSSRDGSGS VYDSESEAGS DSIDDCHNLH RQEENQEAPL IHMYDGNVDQ
301: AYAGRAVDEN LASLISTDLT ELMSKSALES WLDEAPAAPL VVQDSVQTSC ARVSFTTRSF ERKPKLHRLL DPSASDALSV LYAFSSEVSP KSHLLVCVDL
401: FVENVTTEQL ADITIKSEEA SGSKGGMDQT SEGSANIPTL VPVEEIQSLA PEQTAKMLLQ VHFHHHLLPL KLSVLCNGKR HPAKLHPDIA YFVRPLPMDL
501: NAFLCKENQL RGMFEYARRC TFKDHLQKHE QTEESTDHNT DKNLLVAQTL ASKVLSNANV HLVSMDMPVT FSIDDASGLC WRFSSEILST SNPCLITIVA
601: DGHTSEPLDL TVKVNSEDTA FGLNLMNRIV AIIE
001: MAGIRLHVIA PLALAAVSKC ARDPAVYVRR CAANALPKLH DLRLEEHASA IEELVGILLN DHSPGVVGAA AAAFTSICPN NFKLIGKNYK KLCQILPDVE
101: EWGQILLIGT LLRYVVARHG LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY LSRSSCTDTV SSAFDTKETT
201: SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301: LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK
401: VLIQLFRSLD SIKVAAARAT IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML KRIVVYVFEL GEYDLSYDIR
501: DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601: DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS
701: IGDVGSRVKP KSYSLVDPGN GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK ANASYNNIPT LIPMEEISCL
801: EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901: LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI NCEETVFGLN LLNRIANFMV EPSSSAT
101: EWGQILLIGT LLRYVVARHG LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY LSRSSCTDTV SSAFDTKETT
201: SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301: LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK
401: VLIQLFRSLD SIKVAAARAT IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML KRIVVYVFEL GEYDLSYDIR
501: DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601: DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS
701: IGDVGSRVKP KSYSLVDPGN GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK ANASYNNIPT LIPMEEISCL
801: EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901: LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI NCEETVFGLN LLNRIANFMV EPSSSAT
Arabidopsis Description
PAT2AP-3 complex subunit beta [Source:UniProtKB/TrEMBL;Acc:F4IWW1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.